Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq30 405 6e-108
seq602 392 4e-104
seq418 381 7e-101
seq635 269 3e-67
seq339 132 6e-26
seq446 114 2e-20
seq92 111 2e-19
>seq30
Length=8517879
Score = 405 bits (448), Expect = 6e-108
Identities = 690/994 (69%), Gaps = 16/994 (2%)
Strand=Plus/Minus
Query 32293 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTT 32349
||||||| ||| || ||| |||| |||||| |||| | | |||| |||||
Sbjct 2592037 AAATATCAGCACACCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 2591978
Query 32350 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405
|||| ||||| || ||||| | || || || || | | || | || || |||
Sbjct 2591977 -TTGAACTTGACATCACACCCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTA 2591919
Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtt 32465
||||| ||||| ||||| || || ||||| || || |||||||| || | |||
Sbjct 2591918 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 2591859
Query 32466 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 32525
|| | || |||| || || | ||| || || || ||||| || || |||||
Sbjct 2591858 TTGCTGAAGCCCAGCTCCAGTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATT 2591799
Query 32526 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 32585
| || ||||| || || || || ||||| | ||| || || || || |||||
Sbjct 2591798 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCT 2591739
Query 32586 ATAGAGACCGCGT---CTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT 32642
|| ||| || | | ||||| | ||| ||| | | || ||| || |
Sbjct 2591738 ATCCTGACAGCATTGACAATTATATTTC-TCTGACTCTCTGCTCCGAAGGTTTATGTAGC 2591680
Query 32643 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 32702
| |||||| ||||| ||||| || ||||| || || || ||||| ||||| |||||||
Sbjct 2591679 AGATGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGC 2591620
Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762
|| || ||||| || || |||||||| || || || || || ||||| |||||||| |||
Sbjct 2591619 TCATTCGAAAATGTAAGACCGGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCA 2591560
Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822
|| || ||||||||||| |||||||| ||||| |||||||| | | | |||||||
Sbjct 2591559 AAAGAACCAGAAAAGAAGATTCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATGG 2591500
Query 32823 CCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879
||| |||| ||||| |||||||| |||||||| ||||||||||||
Sbjct 2591499 GTGGCTTCTTTGTCCCCAATCCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGC 2591440
Query 32880 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 32939
|||||||| ||||| || ||||| | | | || || ||||||||| || |||||
Sbjct 2591439 ATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCG 2591380
Query 32940 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAG 32999
|| | ||||| |||||||| || || |||||||| ||||| || || || || |||||
Sbjct 2591379 ATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAA 2591320
Query 33000 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33059
|| | || || |||||||| |||||| | ||| || || | || |||||| |||||
Sbjct 2591319 CAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACT 2591260
Query 33060 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33119
|| || ||||||||||| || || |||| ||||| |||||||||| | || || |||
Sbjct 2591259 ATGCCATCACTGGCTGCGAAGAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGGT 2591200
Query 33120 GTTA-GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 33178
| | | | ||| | | ||| || | || | ||||| || || ||||||||||
Sbjct 2591199 TTCAGGGGCCTCCCAGTGCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAA 2591140
Query 33179 TGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAAC 33238
||| ||||| ||||| |||||||| | |||||| ||||| |||| || ||||| || ||
Sbjct 2591139 TGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGAC 2591080
Query 33239 AAATCTATTTGGATTTTTTGCAAGGATTGGTTCC 33272
||| | | || |||| | |||| ||| |||
Sbjct 2591079 AAAGCGACGGGGGTTTTCTCTTAGGAGTGGCTCC 2591046
>seq602
Length=1640730
Score = 392 bits (434), Expect = 4e-104
Identities = 597/848 (70%), Gaps = 4/848 (0%)
Strand=Plus/Plus
Query 32397 AAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACA 32456
|| || |||||||| ||||| ||||| || || ||||| || || |||||||| ||
Sbjct 122189 AAGAAGTTAGTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACT 122248
Query 32457 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 32516
| ||| ||| | || |||| || || | ||| || || || ||||| | ||
Sbjct 122249 CTGAAAACTTTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACGAATTCAGTGTAC 122308
Query 32517 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 32576
||||| | |||||||| || || || || | ||| | ||| | ||||| ||
Sbjct 122309 TGCTTCATTAAAGTGCAATTCATCCCGATGAGATTTATTGGCAAGGCCTCTGTAAGGAAC 122368
Query 32577 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA 32636
|| ||||| || ||| || | || || ||| ||| | | || ||| |
Sbjct 122369 TCCTGTTCTATCCTGACAGCATTGACGATTATTTCTCTGACTCTCTGCTCCGAAGGTTTA 122428
Query 32637 TACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTA 32696
| | | |||||| ||||| || || || ||||| || || || ||||| ||||| |||
Sbjct 122429 TGTAGCAGATGTTTGAACATTAA-CACGCAAAATCACAATGGAGTCCCTCATCTCTGCTA 122487
Query 32697 ATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 32756
|||| | | || ||||| || || || ||||| | || || || || ||||| ||||||
Sbjct 122488 ATTAGTGCATTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTGAGCCAGAATATG 122547
Query 32757 GACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCT 32816
|| ||||| || | ||||||||| |||||||| ||||| |||||||| | | | |||
Sbjct 122548 GATGCAAAAGAACTAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACTACACATTCT 122607
Query 32817 CCATAACCGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 32873
||||| ||| |||| ||||| | |||||||| |||||||| ||||||
Sbjct 122608 CCATAGGTGGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACA 122667
Query 32874 CAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT 32933
|||||||||||||| ||||| || ||||| | | | || || || ||||| ||
Sbjct 122668 CAAGGCATTGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATGTTTAATGTAA 122727
Query 32934 GTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCG 32993
||||| || | ||||| |||||||| || || |||||||| ||||| || || || ||
Sbjct 122728 GTATCGATGAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCA 122787
Query 32994 TAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCA 33053
||||| || | || || |||||||| |||||| | ||| || | | || ||||||
Sbjct 122788 TAGAAACAGCAGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTTCACCAAGTTTTCA 122847
Query 33054 TTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG 33113
||||||||||| |||||||| || ||||| || | ||||| |||||||||| | ||
Sbjct 122848 TTCACTATTCCATCACTGGCCGCGAAAAAAGCAAGCACATGGGATATAAAATATCTCTCC 122907
Query 33114 TCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 33173
|| ||| | || | ||| | | ||| || || || | ||||| || || |||||
Sbjct 122908 TCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTC 122967
Query 33174 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAA 33233
|||||||| ||||| ||||| |||||||| | |||||| ||||| |||| || |||||
Sbjct 122968 CAAAATGAGGCCTCGGCCTTCTTATACATCTGCCAGATATCATGGTATTTGATGGGAAAG 123027
Query 33234 ATAACAAA 33241
|| |||||
Sbjct 123028 ATGACAAA 123035
>seq418
Length=2079112
Score = 381 bits (422), Expect = 7e-101
Identities = 664/960 (69%), Gaps = 18/960 (2%)
Strand=Plus/Plus
Query 32293 AAATATCGGCAT---TTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTT 32349
||||||| ||| || ||| |||| |||||| |||| | | |||| |||||
Sbjct 761001 AAATATCAGCACACCTTCAGTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG 761060
Query 32350 CTTGA----GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTA 32405
|||| ||||| | ||||| | || || || || || | || || || || |||
Sbjct 761061 -TTGAACTTGACATCATGCCCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTA 761119
Query 32406 GTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtt 32465
||||| ||||| ||||| || || ||||| || || |||||||| || | |||
Sbjct 761120 GTTTTGCCTTCCAATGAAATGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACC 761179
Query 32466 tttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATC 32525
|| | || |||| || || | ||| || || |||||||| || || |||||
Sbjct 761180 TTGCTGAAGCCCAGCTCCAGTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATT 761239
Query 32526 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 32585
| || ||||| || || || || ||||| | ||| | || || || || |||||
Sbjct 761240 AAAGTGCAGTTCATCCCGATGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCT 761299
Query 32586 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 32645
|| ||| || | || || ||| ||| | | || ||| || | | |
Sbjct 761300 ATCCTGACTGCATTGACAATTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGA 761359
Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705
||||| ||||| ||||| || ||||| || || || ||||| ||||| ||||||| |
Sbjct 761360 TGTTTGAACATTAAACACGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTA 761419
Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765
|| ||||| || || || ||||| | || || || |||||||| |||||||| |||||
Sbjct 761420 TTCGAAAATGTAAGACCAGGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAA 761479
Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA-TAAGTCTCTCTCCATAACC 32824
|| |||||| |||| |||||||| ||||| |||||| || | | ||||||||
Sbjct 761480 GAACCAGAATAGAAGATTCCTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATAGGT 761538
Query 32825 GGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 32881
||| |||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct 761539 GGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCAT 761598
Query 32882 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 32941
|||||| ||||| || ||||| | | | || || |||||||| ||||| ||
Sbjct 761599 TGTCTCAATAGCGTTGAAGAGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATCGAT 761653
Query 32942 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCA 33001
| ||||| |||||||| || || |||||||| ||||| || || || || ||||| ||
Sbjct 761654 GAGGAGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACA 761713
Query 33002 TCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTAT 33061
|| || || |||||||| |||||| | ||| || || | || ||||||||||||||
Sbjct 761714 GCTGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTAT 761773
Query 33062 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 33121
|| |||||||| || || || |||| ||||| |||||||||| | || || ||| |
Sbjct 761774 GCCATCACTGGCCGCGAAGAAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTT 761833
Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181
|| | ||| | | ||| || || || | ||||| || || ||||||||| |||
Sbjct 761834 CAGGGCCTCCCAGTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGA 761893
Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
||||| || || |||||||| | ||| || ||||| |||| || ||||| || |||||
Sbjct 761894 AGCCTCGGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953
>seq635
Length=1382696
Score = 269 bits (298), Expect = 3e-67
Identities = 347/474 (73%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
|||||||| |||||| | ||| ||| | || | || |||||||||||| || || | |
Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
|| | |||| ||||| || |||||||| || || ||| || | || || | ||
Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
|||||||||| || || |||||||| ||||| || || || || || |||| || | |
Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
| || || || | |||||||| | ||| ||||| | | |||| | ||| |||||||
Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383
Query 62090 TTTG-TAT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
| || ||| |||| ||||||||| | || ||||| || || ||||| ||||||
Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443
Query 62147 CATAATTTTCTCTCGGTTAAAACTCTA-AGGAGATGCGGATTAACTACTTGAAATTCTCC 62205
||||| | | | || || | ||| || | ||| ||||| || | |||||||||||
Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502
Query 62206 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 62265
|| || ||||| |||||||| ||||| |||||||| ||||| | |||||||||||||||
Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562
Query 62266 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 62319
|| ||| ||||||||||| ||||| ||||| || || | | |||||| || ||
Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616
>seq339
Length=2552696
Score = 132 bits (146), Expect = 6e-26
Identities = 106/128 (83%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251
|| ||||||||||| || || ||||| |||||||| ||||| |||||||| ||||| | |
Sbjct 2056698 ACCTGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATA 2056639
Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 2056638 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 2056579
Query 62312 CTATTTCT 62319
|| || ||
Sbjct 2056578 CTGTTCCT 2056571
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| || | ||| |||||||||||||| | || || || || || || || || || |
Sbjct 2031457 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCAGGA 2031398
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
||||||| || || || | ||||| ||||| ||| |||| || |||| || ||||
Sbjct 2031397 TGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTATCCA 2031338
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
||| || || || || ||| |||||| || |||||||| |||||
Sbjct 2031337 GTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCAT 2031292
Score = 95.1 bits (104), Expect = 2e-14
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| ||||||||||||||||||||| || |||||||| || | || || || |||| |
Sbjct 2043623 CTCCACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCG 2043564
Query 63127 ATGTTCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63185
|| || || ||||||||||| || |||||| || |||||| | | || || ||||||
Sbjct 2043563 CTGCTCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCC 2043505
Query 63186 ACGGTTCCA 63194
| |||||||
Sbjct 2043504 ATGGTTCCA 2043496
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489
|||| || || ||||| || || || || |||||||| || || || || || || |
Sbjct 2048235 CATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCAT 2048176
Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549
||||||||||||| ||||| | ||||| || || || || | || ||||| ||||
Sbjct 2048175 AATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGAT 2048116
Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62609
| | ||||||||| || ||||| || ||||| || || || || || || | || |
Sbjct 2048115 ACCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGAC 2048056
Query 62610 TCTTATTAGA 62619
||||| ||
Sbjct 2048055 GTTTATTTGA 2048046
>seq446
Length=2046506
Score = 114 bits (126), Expect = 2e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| ||||||| || || ||||| || || || ||||| || || || || |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| |||||||| ||||| || ||||||||||| |||||||| ||||| |||||||
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 32803 C 32803
|
Sbjct 492490 C 492490
>seq92
Length=5367877
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744
|| ||||| || || | || |||||||| |||||||| ||||| ||||| | |||||
Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855
Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803
||||||||||| | || || ||||| |||||||||||||||||||| || || |||||
Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGC 3850796
Score = 84.2 bits (92), Expect = 3e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104
||||||||||| || ||||| ||||||||||||||||| ||||| | || ||||||
Sbjct 3842359 AAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAAAA 3842300
Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCA 33133
||||| || || ||||| || || |||||
Sbjct 3842299 TATTTCTCATCCGGTGTAAGCTTGTTCCA 3842271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633586037918800
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