Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq39 91.5 1e-13
>seq39
Length=7040410
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|||||||| || || || ||||| ||||||||||| ||||||| |||| |||||| |
Sbjct 3825807 ACAATGCAGATCTTCGTGAAGACCCTGACCGGTAAAACCATCACTCTCGAGGTGGAGCCC 3825866
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| |||||| ||||| || ||| ||||| || || || || ||||||
Sbjct 3825867 AGCGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 3825926
Query 25116 CAACAGCGGATTATTTTTGCCGG 25138
|| ||| || | || ||||||||
Sbjct 3825927 CAGCAGAGGCTGATCTTTGCCGG 3825949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433297353283445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |