Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq24 114 1e-20
>seq24
Length=8999101
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| ||||||||||| | ||| | || || || |||||||||||||| ||
Sbjct 2890499 ACCACCACGCAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGA 2890558
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||| | |||||| || || || ||||| | || ||||| || ||||| |||||
Sbjct 2890559 CAGAGTATGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGG 2890618
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|||||||||||| || ||||| ||| | | || | || || | || |||||
Sbjct 2890619 AATGCCTTCTTTATCCTGGATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGAC 2890678
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || || || || || || |||||||||||
Sbjct 2890679 CTCGAGCGTGATGGTCTTCCCAGTGAGGGTCTTCACGAAAATCTGCAT 2890726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420104686388436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |