Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq110 95.1 1e-14 >seq110 Length=4795302 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 |||||||| ||||| ||||| || |||| ||||||||||| |||||||| |||| ||| Sbjct 96618 TAGCTGGCGATGTTGAAAGGCACACCCAGGCCCATGTCTCCAGACCTCTGGTACAACTGG 96559 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 ||||| |||||||||| | ||||| || || || | ||| || || || || ||| Sbjct 96558 CAGGACAGCTCACCGTTCACCACATAGAACTGGCAGAGGGCGTGGCACGGAGGCAGGGCC 96499 Query 20396 AT 20397 || Sbjct 96498 AT 96497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441340783920520