Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq550 297 2e-75
seq1018 273 3e-68
seq409 215 7e-51
seq1496 210 3e-49
>seq550
Length=1596736
Score = 297 bits (328), Expect = 2e-75
Identities = 832/1265 (66%), Gaps = 24/1265 (2%)
Strand=Plus/Minus
Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955
||||| || || || | | || | ||||||||| | ||| || || |||| ||
Sbjct 814303 GGAATGGTGGTGTTGCGCTTGATGAGCGGGGTCATGACACCGCCTGCCGTCTCGATGCCC 814244
Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCC--CTTCAC 7013
|| ||||| || |||||||| | || | |||||| || || ||| ||| ||| |
Sbjct 814243 AGCGACAGCGGAGTCACGTCGAGCAGCAGCAGGTCCTGCACG--TTC--TCCGACTTGTC 814188
Query 7014 CCG--TTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071
|| | | ||| || || || |||| || ||||| || |||||||| || ||||| ||
Sbjct 814187 CCCGATGAGGATAGCCGCCTGCACCGCAGCGCCGTAGGCCACCGCCTCGTCAGGGTTGAT 814128
Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131
| || ||||| || || ||||| || ||||| | || | || || || |||||
Sbjct 814127 ACTCTTGTTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGAT 814068
Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191
|| || || || || |||| ||||| || | | | || || | ||| | |||
Sbjct 814067 GCGGGTGGAACCGCCCACCAGCACGATCTCCTGGATCTGGCCCTTGTCCAGCTTGGCGTC 814008
Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTC 7251
|| || | || || || || |||| ||||||| ||| ||| |||||
Sbjct 814007 GCGCAGGGCCTTCTCCACCGGCTCCAGGGTGCCGCGGAACAGGTCGGCGTTCAGCTCCTC 813948
Query 7252 AAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTC 7311
|| || || ||||| ||||| || ||||| || ||||| ||||| | || || || ||
Sbjct 813947 GAAGCGGGCGCGGGTGATGGACGTGTAGAAGTCCACGCCCTCGTAGAGGGAGTCGATCTC 813888
Query 7312 AATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAA 7371
||| | | || | | ||| | || ||||| |||||||| || || || || |
Sbjct 813887 GATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCGCAG 813828
Query 7372 ACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTC 7431
|| || | ||| ||| ||| | ||| || ||||| || || || || ||||| ||
Sbjct 813827 CCGCCGCACGGCGCGCTTGTTGGGCGCAATGTCCTTCTTGTGCTTGCGCTTGAACTCCTC 813768
Query 7432 AGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGC 7491
| | ||| | | | | ||||| || || || |||| ||| || || || ||
Sbjct 813767 GGCCAGGTGGCTCACCATGCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTCGCCGGC 813708
Query 7492 GGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACC 7551
|| | || || || ||||| || | || ||| | | | || || || || || ||
Sbjct 813707 CGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGTGCC 813648
Query 7552 ACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAG 7605
|| |||||||| || ||||| |||||| | ||| || | | ||||| || ||
Sbjct 813647 GCCGCCCAGGTCGAAGATGAGCACGTTCTTCTCGCCGCCGGCGGAGCCCTTCTTGTCCAG 813588
Query 7606 ACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGC 7665
|| || ||||| || |||||||| || || || || || || || ||| ||||| |
Sbjct 813587 GCCATAGGCGATGGCAGCCGCCGTGGGCTCGTTGATGATGCGCAGCACGTTGAGGCCGGT 813528
Query 7666 AATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725
|| || |||| || || || || || || ||||| ||||| || ||||| ||||||||
Sbjct 813527 GATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAATAGGCGGGGACCGT 813468
Query 7726 TACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785
| ||||||| | ||||| || || || | ||| ||||| || ||||| || ||
Sbjct 813467 GATGACCGCGCTCTGCACTTTGCCCCCCAGGTAGGCTTCGGCGATCTCCTTCATCTTTGT 813408
Query 7786 AAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT-TCACCGTTAAAATCAA 7844
|| ||||| || || ||||| || | | | | || | | | || || || | || |
Sbjct 813407 CAGCACCATGGACGAGATCTCCTCCGG-GAAGAAGGTCTTGATCTCCCCCTTGTACTCCA 813349
Query 7845 CTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATAT 7904
| | | |||| || || | | || | || ||| ||| | |||||| |
Sbjct 813348 CCTGCACTTTGGGCTTC-CCTC--CCTCGCTCACCACGCGGAACGGCCAGTGTTTCATGT 813292
Query 7905 CGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACT 7963
| || ||| || | |||| |||||| | |||||| || | ||| || || || |
Sbjct 813291 CCGACTGCACC-GTGGCGTCCTCAAACTTCCGTCCGATCAGCCTCTTGGCGTCGAAGATG 813233
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| ||||||||||||| |||||||| || ||||| ||||| || || ||
Sbjct 813232 GTGTTGGTGGGGTTCATGGCCACCTGGTTCTTGGCGGCGTCGCCGATGAGGCGCTC---G 813176
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| || || || || ||||| ||||| || || || || |||||||| || || |||
Sbjct 813175 GTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATT 813116
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| || | ||| ||| |||| || |||||||| || || || || | || || |||
Sbjct 813115 TCCACCTTGCCGTGTTGGAAGACTCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCCG 813056
Query 8144 ATTGC 8148
|| ||
Sbjct 813055 ATAGC 813051
>seq1018
Length=501931
Score = 273 bits (302), Expect = 3e-68
Identities = 1024/1592 (64%), Gaps = 24/1592 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || ||||||| || || ||||| || ||||| || ||||| || ||
Sbjct 485765 TCATCCTCTGCTTTATATTTCTCAGCATCCTGCACCATGCGCTCGATGTCCTCCTTGCTC 485824
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| || || || || || | || || || | | |||||| |
Sbjct 485825 AGCCGGCCCTTGTCATTGGTGATGGTGATTTTGTTGGCCTTGCCAGTGCTCTTATCCATA 485884
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| | ||||| | ||||||||| ||||| | || || | || | || || || ||
Sbjct 485885 GCTGTAACATTTAGAATACCATTGGCATCTATGTCAAAAGTCACCTCGATCTGAGGAATA 485944
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | ||||| | || || || |||| ||||| || || | |||| |||
Sbjct 485945 CCTCGGGGTGCAGGAGGGATTCCAGTTAGGTCAAAGCGCCCCAGCAGGTTGTTGTCCCGT 486004
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| | | || ||||| || || || | || |||| |||| || ||||||
Sbjct 486005 GTCATGGCCCGCTCACCCTCGTACACCTGGATCAGCACCCCAGGCTGGTTATCTGAATAG 486064
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| | ||| || ||| | ||| | || || || | || | | || | || |||
Sbjct 486065 GTGGTGAAAATCTGTGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTGATGAGCGCCGTC 486124
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| | || ||| || || || || || ||||| || | |||||||| || | ||||
Sbjct 486125 ATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGGGCCACGTCCAGCAGCAGCAGG 486184
Query 6989 TCTTGAACAGATTCGTTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044
|| || || ||| ||| ||| | ||| | | |||||| || || || | |||||
Sbjct 486185 TCCTGCACC--TTC--TCCGACTTGTCCCCCATCAGGATGGCCGCCTGCACTGCTGCCCC 486240
Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104
|| || || |||||||| ||||| || |||| || ||||| || ||||| || ||
Sbjct 486241 ATAGGCTACTGCCTCATCAGGGTTGATGCTTTTGTTGAGTTCACGGCCATTAAAGTAGTC 486300
Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164
| | || | || | || || || || || || || || || ||||| || ||||
Sbjct 486301 CTGCAGCAGCTTCTGCACCTTAGGAATACGAGTGGAGCCTCCTACTAAAACAATGTCATG 486360
Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224
| ||| | |||||| ||||| | || ||||| | || || ||||| |||| |
Sbjct 486361 AATTTTGGCTTTATCCATCTTAGCATCCCGAAGAGCCTTCTCCACAGGCTCCAGAGTGCC 486420
Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284
| || | ||| ||||| |||||||| || || | ||| ||||| || ||||| ||
Sbjct 486421 CCTAAATAGGTCTGCGCACAGCTCCTCAAAGCGCGCCCTGGTGATGGACGTGTAGAAGTC 486480
Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344
||||| ||| | | ||| || || || | | | | || | | || || | || ||
Sbjct 486481 CACGCCCTCGAACAGCGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGAGGACAGGGTGCG 486540
Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404
||| || | ||| || ||||| || | || || | ||| ||| ||| | | ||
Sbjct 486541 CTTGGCCCTCTCGCAGGCCGTGCGCAGCCGCCGCACGGCGCGCTTGTTCTGGCTCAGGTC 486600
Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464
||| | || || | || ||||| || |||||| | | || | ||||| ||
Sbjct 486601 CTTCCTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGCTGTCGAAGTC 486660
Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAAT 7524
|| || |||| ||| || || ||||| || || || || || |||| || | || ||
Sbjct 486661 CTCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGACGCCGTCGTCGAT 486720
Query 7525 GTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC 7584
| | | ||| || || || || || || |||||||| || ||||| ||||| ||
Sbjct 486721 CGTCAGGACCGACACGTCGAAGGTGCCGCCGCCCAGGTCGAAGATGAGCACGTTGCACTC 486780
Query 7585 GTCGT--CTTTGTTCTTATCG----AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638
| || | | | || || ||||| ||||| ||||||||||| || || ||
Sbjct 486781 GCCGCGGCCCCGGCCAGCGCGGTCCAGGCCGTAGGCGATGGCCGCCGCCGTGGGCTCGTT 486840
Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698
|| || || || ||| || || || || | |||| || || || || || || ||
Sbjct 486841 GATGATGCGCAGCACGTTGAGCCCCGCGATCGCCCCCGCGTCCTTGGTGGCCTGGCGCTG 486900
Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758
||| ||||| |||||||| || || || | ||||||| ||| || || || || ||
Sbjct 486901 CGAGTCGTTGAAGTAGGCGGGCACGGTGATCACCGCGTTCGTCACCGCCTGGCCCAGGTA 486960
Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818
|| || || | || ||||| || | || ||||| || || ||||| || | ||
Sbjct 486961 CGCCTCGGCCGTCTCCTTCATCTTCGCCAGCACCATGGACGAGATCTCCTCGGGGTAGAA 487020
Query 7819 CTGTTTCGTTTCACCGTT-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877
| || | || || || | ||| || | | | |||| || | ||| | || |
Sbjct 487021 CGCCTTGCTCTCCCCCTTGTAGCTCACCTGC-ACCTTGGGCTTGT-CGC--CCTCGCTCA 487076
Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937
|| ||| ||| | ||||| || | || ||| ||| ||||| | |
Sbjct 487077 CCACGCGGAACGGCCAGTGCTTCATGTCCGCCTGCACCACCGCGTCGCCGAACTTGCGGC 487136
Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997
|||| || ||||| || || || || ||||| | ||||||| || |||||||| |
Sbjct 487137 CGATCAGCCGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGG 487196
Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTT 8056
|||| ||||||| || || || | || || ||||| ||||| | |||| || ||
Sbjct 487197 CCGCATCCCCGACCAGCCGCTC---CGTGTCGGTGAACGCCACGTA-GCTGGGCGTGGTG 487252
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || |||||||| || || || || || | ||| || | || || ||||||
Sbjct 487253 CGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCAC 487312
Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|| || || || || | || || ||||| ||
Sbjct 487313 GAGTAGGTGGTGCCCAGGTCGATGCCGATGGC 487344
>seq409
Length=2050159
Score = 215 bits (238), Expect = 7e-51
Identities = 371/539 (69%), Gaps = 0/539 (0%)
Strand=Plus/Minus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || |||||||| ||||| || | || |||| |||||| || || ||
Sbjct 860429 GCACCATAAGCCACAGCCTCATCAGGGTTGATGCTCTTGTTCAATTCTTTCCCATTGAAG 860370
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| ||| | | ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 860369 AAGTCCTGTAAAAGCTTCTGAATCTTGGGGATACGAGTAGAACCACCCACCAAGACAATG 860310
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | ||||| || | ||| | || ||||| | |||||| || || ||||
Sbjct 860309 TCATGAATCTGGGATTTGTCAAGCTTGGCATCCCGAAGGGCTTTTTCTACTGGATCCAGG 860250
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
|||||||||||| | || ||| ||||| || || ||||||||||| || |||
Sbjct 860249 GTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCGGGCCCGGGTAATGGAGGTGTAG 860190
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
||||||| || || || | |||||||||||||| | | || | | ||||| |
Sbjct 860189 AAATCAATTCCTTCATACAGGGAATCAATTTCAATACTGGCCTGGGTGCTGGAAGAGAGT 860130
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| |||||||| || ||||| || || |||| || || | || | | ||| |
Sbjct 860129 GTACGCTTTGCACGTTCACAAGCAGTACGTAGGCGGCGGACAGCCCTCTTGTTCTCACTT 860070
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459
|| || ||||| || || ||||| || ||| || || || | | || ||
Sbjct 860069 ATGTCCTTCTTGTGCTTGCGTTTGAATTCTGCAATAAAATGGTTGACCATTCGATTGTCA 860010
Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519
|| ||||| ||||||||||| || || || || || | ||||||||||||||| || ||
Sbjct 860009 AAGTCTTCTCCACCCAAGTGGGTGTCTCCTGCTGTAGATTTGACTTCAAAGATCCCATCT 859950
Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578
||||| | | | || |||||||| || || || |||| |||||| || || || ||
Sbjct 859949 TCAATAGTGAGAATTGACACATCAAAAGTGCCTCCTCCCAAGTCAAAGATCAGCACATT 859891
Score = 86.0 bits (94), Expect = 8e-12
Identities = 105/141 (74%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653
|| ||||| | || || || || || || || ||||| |||||||| || | ||| |||
Sbjct 859787 TTTTTATCCAAGCCATAAGCAATGGCAGCAGCAGTTGGCTCATTAATGATTCTAAGTACA 859728
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||| ||||||||||| | |||||||| || || || ||||| || || || |||||
Sbjct 859727 -TTCAGACCAGCAATAGTCCCAGCATCTTTGGTAGCCTGACGTTGAGAGTCATTGAAGTA 859669
Query 7714 GGCCGGGACCGTTACGACCGC 7734
|| || || || || || ||
Sbjct 859668 TGCAGGTACTGTGACCACGGC 859648
Score = 82.4 bits (90), Expect = 1e-10
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694
||||||||||| || || || ||||| | ||| || | | |||||| |||||
Sbjct 861252 CCCTTATCATTGGTGATGGTGATCTTGTTTTCTTTCCCTGTGCTCTTATCCACAGCAGAC 861193
Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754
||||| | || ||||| ||||||| ||| || | || | ||| || || ||| |
Sbjct 861192 ACATTGAGGATGCCATTGGCATCAATATCAAATGTGACCTCAATCTGGGGAACACCACGG 861133
Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814
||||| | || || || || | ||||| | ||||| | |||||||| | | | |
Sbjct 861132 GGTGCAGGGGGTATGCCTGTGAGTTCAAACTTGCCAAGCAGGTTGTTATCCTTAGTCATG 861073
Query 6815 TTACGTTCACCTTCATAGACTTTAA 6839
||||||||||||||| || ||||
Sbjct 861072 GCACGTTCACCTTCATAAACCTTAA 861048
>seq1496
Length=160839
Score = 210 bits (232), Expect = 3e-49
Identities = 791/1231 (64%), Gaps = 16/1231 (1%)
Strand=Plus/Minus
Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985
||||| | || ||| || || || || || ||||| || | |||||||| || | |
Sbjct 13971 GTCATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGGGCCACGTCCAGCAGCAGC 13912
Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045
||||| || || || | || ||| | | |||||| || || |||| ||| |||
Sbjct 13911 AGGTCCTGCACCTCCTCCGACTTGTCCCCCATCAGGATGGCCGCCTGCACCGCCGCGCCG 13852
Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105
|| || |||||||| |||||||| || | || ||||| || || | || | |||
Sbjct 13851 TAGGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCGCGCCCCTGGAAGAAGTCC 13792
Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165
| || | || | || ||||| || || || || ||||||| ||| || || |
Sbjct 13791 TGCAGCAGCTTCTGCACCTTGGGGATGCGCGTGGAGCCTCCGACCAGAACAATGTCGTGA 13732
Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225
| ||| || || | ||| | || | || | || || || || ||||
Sbjct 13731 ATGCTCGCCTTGTCCAGCTTGGCATCGCCCAGCGCCTTCTCCACCGGCTCCAGGGTGGCC 13672
Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285
| ||| | |||| ||||| |||||||| || || | ||| ||||| || ||||| ||
Sbjct 13671 CTGAAGAGGTCCGCGCACAGCTCCTCAAAGCGCGCCCTGGTGATGGACGTGTAGAAGTCC 13612
Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345
||||| ||| | | ||| || || || | | | | || | | || || | || |||
Sbjct 13611 ACGCCCTCGAACAGCGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGAGGACAGGGTGCGC 13552
Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405
|| || | ||| || ||||| || | || || | ||| ||| ||| | | ||
Sbjct 13551 TTGGCCCTCTCGCAGGCCGTGCGCAGCCGCCGCACGGCGCGCTTGTTCTGGCTCAGGTCC 13492
Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465
||| | || || | || ||||| || |||||| | | || | ||||| ||
Sbjct 13491 TTCCTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGCTGTCGAAGTCC 13432
Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525
|| || |||| ||| || || ||||| || || || || || |||| || | || ||
Sbjct 13431 TCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGACGCCGTCGTCGATC 13372
Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585
| | | ||| || || || || || || |||||||| || ||||| ||||| |||
Sbjct 13371 GTCAGGACCGACACGTCGAAGGTGCCGCCGCCCAGGTCGAAGATGAGCACGTTGCACTCG 13312
Query 7586 TCGT--CTTTGTTCTTATCG----AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639
|| | | | || || ||||| ||||| ||||||||||| || || ||
Sbjct 13311 CCGCGGCCCCGGCCAGCGCGGTCCAGGCCGTAGGCGATGGCCGCCGCCGTGGGCTCGTTG 13252
Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699
|| || || || ||| || || || || | |||| || || || || || || |||
Sbjct 13251 ATGATGCGCAGCACGTTGAGCCCCGCGATCGCCCCCGCGTCCTTGGTGGCCTGGCGCTGC 13192
Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759
|| ||||| |||||||| || || || | ||||||| ||| || || || || |||
Sbjct 13191 GAGTCGTTGAAGTAGGCGGGCACGGTGATCACCGCGTTCGTCACCGCCTGGCCCAGGTAC 13132
Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819
| || || | || ||||| || | || ||||| || || ||||| || | |||
Sbjct 13131 GCCTCGGCCGTCTCCTTCATCTTCGCCAGCACCATGGACGAGATCTCCTCGGGGTAGAAC 13072
Query 7820 TGTTTCGTTTCACCGTT-AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGAT 7878
|| | || || || | ||| || | | | |||| || | ||| | || |
Sbjct 13071 GCCTTGCTCTCCCCCTTGTAGCTCACCTGC-ACCTTGGGCTTGT-CGC--CCTCGCTCAC 13016
Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938
|| ||| ||| | ||||| || | || ||| ||| ||||| | ||
Sbjct 13015 CACGCGGAACGGCCAGTGCTTCATGTCCGCCTGCACCACCGCGTCGCCGAACTTGCGGCC 12956
Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998
||| || ||||| || || || || ||||| | ||||||| || |||||||| ||
Sbjct 12955 GATCAGCCGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCAGCGCCACCTGGTTCTTGGC 12896
Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTC 8057
||| ||||||| || || || | || || ||||| ||||| | |||| || || |
Sbjct 12895 CGCATCCCCGACCAGCCGCTC---CGTGTCGGTGAACGCCACGTA-GCTGGGCGTGGTGC 12840
Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117
| || || |||||||| || || || || || | ||| || | || || |||||||
Sbjct 12839 GGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACCCCCACGCACG 12780
Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGC 8148
| || || || || | || || ||||| ||
Sbjct 12779 AGTAGGTGGTGCCCAGGTCGATGCCGATGGC 12749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635086729054520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |