Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq339 95.1 1e-14 >seq339 Length=2552696 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || |||||||||| || |||||| |||| ||| | || || || || Sbjct 2045407 CTCATCTTTGCTGGTGTACTCTACAACTTCTGTGCACAGATTGCTGCATTTGATGGTTCC 2045348 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| ||||| | ||| ||||||||||||||||| || || Sbjct 2045347 CAGGTTCTGCTGGTTGCTCTTCCGATTGCAAGAATCTTTGTAGAGCATGTAGGGGGTGCC 2045288 Query 106612 CGTCTCCGTCTGTGACTTGA 106631 |||||| ||||| |||| || Sbjct 2045287 CGTCTCTGTCTGAGACTCGA 2045268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589938004267720