Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq1357 87.8 1e-12
seq1522 86.0 5e-12
>seq1357
Length=230225
Score = 87.8 bits (96), Expect = 1e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 822 GGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGTTG 881
|||||||| | || || ||||||| | ||||| || |||||||||| || ||
Sbjct 186928 GGTCCAGGAGCGCAGGTCGTCATTCAGGGCGATGTAATCAGCGCCATCATAGCTGTGCTG 186869
Query 882 ACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGGAG 941
|| ||||||||| |||||| | ||||| |||||||| | |||||||||||| | |||
Sbjct 186868 ACTGTAGCCTCGGAGGAGGCTGCCATCTGGCCCCACGTCGCAGCCGGACATCACCTTGAG 186809
Query 942 GGTATG 947
||| ||
Sbjct 186808 GGTGTG 186803
>seq1522
Length=110136
Score = 86.0 bits (94), Expect = 5e-12
Identities = 116/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 779 CTTCTAATTTCCTTTTAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGAT 838
|||| | || || || || ||||| | | |||||| |||||||||| || || |
Sbjct 34104 CTTCCCACTTGCTCTTGGAGATTTGCGCCGCCATGTCCGCCGCGGTCCAGGAGCTCAGGT 34163
Query 839 CTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGA 898
| || ||||| | | ||||| |||||||||||||| | || ||||| | || ||||
Sbjct 34164 CCTCGTTCAAGGCCACATAGTCGGTGCCATCATAGGCCAGCTGCCAGTATGCGCGGAGGA 34223
Query 899 GGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGGA 940
| ||| || |||||||| | |||||| ||||| | ||||
Sbjct 34224 AGTGTCCCTCGGGCCCCACTTCGCAGCCGTACATCAACTGGA 34265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397719069702168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |