Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq24 100 2e-16
>seq24
Length=8999101
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
|||||||| | |||| |||| || || |||||||| |||||||| || | | ||
Sbjct 2890512 CTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGAGTATGCCCA 2890571
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| |||||||| || || ||||| || || ||||||||||| | || | || || ||
Sbjct 2890572 TCTTCCAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGGAATGCCTTCTTTA 2890631
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946
|| ||||| ||| || |||| | || || ||| || |||| || |||
Sbjct 2890632 TCCTGGATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGACCTCGAGCGTGATG 2890691
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| || || ||||| |||||||| || |||||||| ||
Sbjct 2890692 GTCTTCCCAGTGAGGGTCTTCACGAAAATCTGCATCTT 2890729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324610640592984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |