Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq602 446 2e-120
seq30 439 3e-118
seq418 434 1e-116
seq635 205 1e-47
seq34 138 1e-27
seq446 132 5e-26
seq339 127 2e-24
seq956 87.8 2e-12
>seq602
Length=1640730
Score = 446 bits (494), Expect = 2e-120
Identities = 667/938 (71%), Gaps = 14/938 (1%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||||| || | | || | || ||| || |||||
Sbjct 122107 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGCC--CGTTGAACTTGACATCACGCCCATC 122164
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| | ||| ||| | ||||| || |||||| |||||||| || || ||||| ||
Sbjct 122165 CTCTAATACTCGCCTACTCTCTT---AAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | ||| |||| || | || | ||
Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| ||||| || |||| | | || ||||| | | |||||||| || || |
Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGAT-ATAAT 18908
|| | || | || |||||||| || || |||||||| | || || | ||| || ||
Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCAT-TGACGATTAT 122400
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| ||||| | || ||| | ||| |||||||| ||||| || || |||||
Sbjct 122401 TTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAA 122459
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||||||||| |||||||| ||||| || || | | |||| |||||||| | |||||||||
Sbjct 122460 ATCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCAT 122519
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| ||||| ||| || | ||||||||| || ||||| || | ||||||||| || |||||
Sbjct 122520 CAATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTC 122579
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
||||||||||| || |||| | ||||||||| | || || || | |||||| |
Sbjct 122580 CACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATG 122639
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
|| |||||||| |||||||| |||||||| ||||||||||| |||| || || || |
Sbjct 122640 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAA 122699
Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268
| ||| | | || ||||| || | ||| || | | |||||||||||| || ||
Sbjct 122700 TTCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTG 122759
Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
|| ||||| || || ||||| || || || ||||| | |||||||| ||||| |||||
Sbjct 122760 TATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTC 122819
Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388
| ||| | | ||||| |||||||| |||||||||||||| || || ||||| ||
Sbjct 122820 TTGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGC 122879
Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT--AATGTATTCCAATCATTAATA 19446
| ||||| ||||||| | | || || ||||| | | | ||| | | ||
Sbjct 122880 AAGCACATGGGATATAAAATATCTCTC--CTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 122937
Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506
|| || || | || || || ||| |||||||||| || ||||| || || ||||||||
Sbjct 122938 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATC 122997
Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
| ||| |||||| | |||| || ||||| || |||||
Sbjct 122998 TGCCAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035
>seq30
Length=8517879
Score = 439 bits (486), Expect = 3e-118
Identities = 666/940 (71%), Gaps = 11/940 (1%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||||| || || | || | || ||| || |||||
Sbjct 2592012 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACACCCATC 2591955
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | | ||| || | |||||| |||||||| || || ||||| ||
Sbjct 2591954 CTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 2591895
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | || |||| || | || | ||
Sbjct 2591894 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 2591835
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || || |||| ||| || ||||| | | || ||||| || || |
Sbjct 2591834 AGTCTGTCGGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 2591775
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA--TA- 18906
|| || || | || | ||| || || || |||||||| | || || | ||| | ||
Sbjct 2591774 TTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCTATCCTGACAGCAT-TGACAATTAT 2591716
Query 18907 ATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCA 18966
|| | ||||| | || ||| | ||| |||||||| ||||| ||||| |||
Sbjct 2591715 ATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAAACACGCA 2591656
Query 18967 AAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGC 19026
||||||||||| |||||||| ||||| || || | ||||| |||||||| | ||| |||
Sbjct 2591655 AAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCGGGC 2591596
Query 19027 ATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCT 19086
|||||||||| ||| || | ||||||||| || ||||| || ||||||||||| || |||
Sbjct 2591595 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCT 2591536
Query 19087 TCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCAT 19146
|| ||||||||||| || |||| | |||||||| | || || || | ||||||
Sbjct 2591535 TCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATCCAA 2591476
Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206
|| |||||||| |||||||| |||||||| ||||||||||| |||| || || ||
Sbjct 2591475 CACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 2591416
Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266
| | ||| | | ||||||||| || | ||| || | | |||||||||||| ||
Sbjct 2591415 AATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTTCAGAG 2591356
Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326
|| || ||||| || || ||||| || || || ||||| | |||||||| ||||| |||
Sbjct 2591355 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACT 2591296
Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386
|| | ||| | || ||||| |||||| | ||||| |||||||| ||||| || ||
Sbjct 2591295 TCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGAAGAAA 2591236
Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA--TGTATTCCAATCATTAA 19444
|| | ||||| ||||||| | | || || | | || | | | ||| | | |
Sbjct 2591235 GCCAGGACATGGGATATAAAATATCTCTCCTCAG-GTTTCAGGGGCCTCCCAGTGCTGGA 2591177
Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504
| || | || | || || || ||| |||||||||| || ||||| || || |||||||
Sbjct 2591176 TGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACA 2591117
Query 19505 TGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
| | ||| |||||| | |||| || ||||| || |||||
Sbjct 2591116 TCTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAA 2591077
>seq418
Length=2079112
Score = 434 bits (480), Expect = 1e-116
Identities = 663/938 (71%), Gaps = 15/938 (2%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||||| || || | || | || ||| | |||||
Sbjct 761026 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCATGCCCATC 761083
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| || | ||||| || |||||||| |||||||| || || ||||| ||
Sbjct 761084 CTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 761143
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | || |||| || | || | ||
Sbjct 761144 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATA 761203
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| ||||| ||||||| ||| || ||||| | | || ||||| || || |
Sbjct 761204 AGTCTGTCCGCCACAAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 761263
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAAT 18908
|| || || | || ||||| || || || |||||||| | ||||| | ||| | | ||
Sbjct 761264 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTGACTGCAT-TGACAATTAT 761322
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| ||||| | || ||| | || |||||||| ||||| ||||| |||||
Sbjct 761323 TTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGATGTTTGAACATTAAACACGCAAA 761382
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||||||||| |||||||| ||||| || || | | ||| |||||||| | |||||||||
Sbjct 761383 ATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCAGGCAT 761442
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| ||||| ||| || | ||||||||| || ||||| || |||||| |||| || |||||
Sbjct 761443 CAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATTCCTTC 761502
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
|||||| ||| || ||| ||||||||| | || || || | ||||||
Sbjct 761503 CACTGCTCTAAAGGCTCCTACATGTTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAGCG 761562
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
|| |||||||| |||||||| |||||||| ||||||||||| |||| || || || |
Sbjct 761563 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAA 761622
Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268
| ||| | | |||||||| | ||| || | | |||||||||||| || ||
Sbjct 761623 TTCCCTCTCTTTGGAATCTTTAA-----GTATCGATGAGGAGACTGTACATTTCAGAGTG 761677
Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
|| ||||| || || ||||| || || || ||||| || |||||||| ||||| |||||
Sbjct 761678 TATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCTGAACTTC 761737
Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388
| ||| | || || || |||||||| ||||| |||||||| || || || || ||
Sbjct 761738 TTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGAAGAAAGC 761797
Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT--AATGTATTCCAATCATTAATA 19446
| ||||| ||||||| | | || || ||||| | | | ||| | | ||
Sbjct 761798 CAGCACATGGGATATAAAATATCTCTC--CTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 761855
Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506
|| || || | || || || ||| ||||||||| |||||||| ||||| ||||||||
Sbjct 761856 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCTTATACATC 761915
Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
| ||| |||||| | |||| || ||||| || |||||
Sbjct 761916 TGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953
>seq635
Length=1382696
Score = 205 bits (226), Expect = 1e-47
Identities = 327/466 (70%), Gaps = 9/466 (2%)
Strand=Plus/Plus
Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063
|||| | |||| | |||||| ||||| |||||||| ||||| |||| || |||||
Sbjct 1180165 GCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAG 1180224
Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123
||||||||||| | || || |||| || | ||| || ||||| || || || ||
Sbjct 1180225 TGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATGTGGATATTCAGTGACTGGCTT 1180284
Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183
|||||||| || |||||||| |||||||||| | | || | || | || |||
Sbjct 1180285 TGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGAACTGTTTTCTGAGAGATTTCC 1180344
Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGAT-TAGTAT--TTTGAATAGAT 47240
|| || || ||||| | ||| || | || ||||| | | | |||| | || || |||
Sbjct 1180345 CACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATTTCTGGTATGCTCTGGATGGAT 1180404
Query 47241 CCTCCgttttctataattttgttttttaa---ttcatttgaccaaagttttcgttcagtt 47297
|| | |||| | |||||| | |||||| ||| | || ||||
Sbjct 1180405 CCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATT---CCATAAGCCCCGCCCAGTA 1180461
Query 47298 aatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTA 47357
| | || | | ||||||||| ||||| ||||||||||| |||| |||||||| |
Sbjct 1180462 AGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCCCGATAAGACTCTACGAGTG 1180521
Query 47358 TATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGAT 47417
|| ||||| || ||||| ||||| ||||| ||||||||||| | ||| |||||||||||
Sbjct 1180522 TAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCCCAGAATCTGAGCAGTTGAA 1180581
Query 47418 GCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATT 47463
|| |||||||| | |||| | ||| || || ||||||||| |||
Sbjct 1180582 GCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCTTACTCCACATT 1180627
>seq34
Length=7729394
Score = 138 bits (152), Expect = 1e-27
Identities = 298/443 (67%), Gaps = 36/443 (8%)
Strand=Plus/Minus
Query 18936 GTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACT 18995
|| ||| |||||||| ||||||||| ||||||| | |||||| |||||||| |||||
Sbjct 4966378 GTGTAGCAGATGTTTGAACATCAAATATGCAAAGTGACAATGGAGTCCCTCATCTCTG-- 4966321
Query 18996 TATCAATTCATTAGAAAA-TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATA 19054
|||||| ||||| ||| | ||||| ||||| || || ||| || || ||||||
Sbjct 4966320 ------TTCATTGGAAAAATGTAAGACCAGACATCAATCTTCATTTCTTGAATGAGAATA 4966267
Query 19055 TAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTT 19114
| || ||||| || |||| ||||||||| | ||| | ||||||||||| |||| ||
Sbjct 4966266 TGGATGCAAAAGAACCAGGAAAGAATATTCTTTCCATAGCTGCAAAAGCTACTACATATT 4966207
Query 19115 CTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA 19174
|||||| | || | |||| | || ||||| || || ||| ||||
Sbjct 4966206 CTCCATTTTTGGCCCC--------CAATCAAACACAAGGCCCAGTCTGCTTTC---TTTA 4966158
Query 19175 CACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACAT 19234
||| | ||||||||| |||| || || | | | | ||| | | |||||||| ||
Sbjct 4966157 TACAAGACATTGTCTCAATAGTGTTGAAAGGGAATGTCCTCTCTTTGGAATCTTTAA-AT 4966099
Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294
|| || | | | | || ||||| ||||| | ||||| | || || |
Sbjct 4966098 ----ATTGATGAGGAGATTATATATTTCAGAATGTTTGTTTTCCA--------TGGAAAC 4966051
Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTG-TACTTCACTACAAAATCTTTCGACCAAATTT 19353
| |||||| | | |||||| ||||| ||||| | ||| || ||| |||
Sbjct 4966050 CATAAAAATAGAGGGTTTCTGTAATCTGAAACTTCTTGGCTAAACTACTCTACC--GTTT 4965993
Query 19354 TCATTAACTATTCCATCACTAGC 19376
||||| ||||| |||||||| ||
Sbjct 4965992 TCATTCACTATGCCATCACTGGC 4965970
>seq446
Length=2046506
Score = 132 bits (146), Expect = 5e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | ||||| |||||||| | ||||||||||||||||| ||| |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||||||||| || ||||| || ||||||||||| || ||||| ||||||||||| |
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 19103 CAACTAGTCTTTCTCC 19118
| |||| | ||||||
Sbjct 492490 CTACTACACGTTCTCC 492475
Score = 91.5 bits (100), Expect = 2e-13
Identities = 109/146 (75%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||||| || || | || | || ||| || |||||
Sbjct 493937 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACGCCCATC 493880
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || |||||||| |||||||| || || ||||| ||
Sbjct 493879 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 493820
Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755
|||||||| ||||||||||| | |||
Sbjct 493819 TCCATAAAGTCAAATGGATTCTCTAC 493794
>seq339
Length=2552696
Score = 127 bits (140), Expect = 2e-24
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
||||||||||| |||| |||||||| | || ||||| || ||||| ||||| |||||
Sbjct 2056695 TGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGAC 2056636
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447
||||||||||| | ||| ||||||||||| || |||||||| | |||| | ||| ||
Sbjct 2056635 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTG 2056576
Query 47448 TTTCTTACTCCATAT 47462
|| ||||||||||||
Sbjct 2056575 TTCCTTACTCCATAT 2056561
>seq956
Length=748348
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||||| || || | || | || ||| || ||||
Sbjct 286056 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACGGCCATC 286113
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||| | ||| | ||||| || |||||||| |||||||| || || ||||| ||
Sbjct 286114 CTCTGAAACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 286173
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | || |||| || | || | ||
Sbjct 286174 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 286233
Query 18790 AGTCTATCCGCTACAAATTTAATATA 18815
||||| || || || |||| ||| ||
Sbjct 286234 AGTCTGTCGGCCACGAATTCAATGTA 286259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562068026032920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |