Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq602 446 2e-120 seq30 439 3e-118 seq418 434 1e-116 seq635 205 1e-47 seq34 138 1e-27 seq446 132 5e-26 seq339 127 2e-24 seq956 87.8 2e-12 >seq602 Length=1640730 Score = 446 bits (494), Expect = 2e-120 Identities = 667/938 (71%), Gaps = 14/938 (1%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||||| || | | || | || ||| || ||||| Sbjct 122107 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGCC--CGTTGAACTTGACATCACGCCCATC 122164 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | | ||| ||| | ||||| || |||||| |||||||| || || ||||| || Sbjct 122165 CTCTAATACTCGCCTACTCTCTT---AAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | ||| |||| || | || | || Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| ||||| || |||| | | || ||||| | | |||||||| || || | Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGAT-ATAAT 18908 || | || | || |||||||| || || |||||||| | || || | ||| || || Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCAT-TGACGATTAT 122400 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||||| | || ||| | ||| |||||||| ||||| || || ||||| Sbjct 122401 TTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAA 122459 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||||||||| |||||||| ||||| || || | | |||| |||||||| | ||||||||| Sbjct 122460 ATCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCAT 122519 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || ||||| ||| || | ||||||||| || ||||| || | ||||||||| || ||||| Sbjct 122520 CAATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTC 122579 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||||||||||| || |||| | ||||||||| | || || || | |||||| | Sbjct 122580 CACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATG 122639 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||||||| |||||||| ||||||||||| |||| || || || | Sbjct 122640 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAA 122699 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | ||| | | || ||||| || | ||| || | | |||||||||||| || || Sbjct 122700 TTCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTG 122759 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || ||||| || || || ||||| | |||||||| ||||| ||||| Sbjct 122760 TATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTC 122819 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||| | | ||||| |||||||| |||||||||||||| || || ||||| || Sbjct 122820 TTGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGC 122879 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT--AATGTATTCCAATCATTAATA 19446 | ||||| ||||||| | | || || ||||| | | | ||| | | || Sbjct 122880 AAGCACATGGGATATAAAATATCTCTC--CTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 122937 Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506 || || || | || || || ||| |||||||||| || ||||| || || |||||||| Sbjct 122938 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATC 122997 Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 | ||| |||||| | |||| || ||||| || ||||| Sbjct 122998 TGCCAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035 >seq30 Length=8517879 Score = 439 bits (486), Expect = 3e-118 Identities = 666/940 (71%), Gaps = 11/940 (1%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||||| || || | || | || ||| || ||||| Sbjct 2592012 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACACCCATC 2591955 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | | ||| || | |||||| |||||||| || || ||||| || Sbjct 2591954 CTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 2591895 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || |||| || | || | || Sbjct 2591894 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 2591835 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || || || |||| ||| || ||||| | | || ||||| || || | Sbjct 2591834 AGTCTGTCGGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 2591775 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA--TA- 18906 || || || | || | ||| || || || |||||||| | || || | ||| | || Sbjct 2591774 TTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCTATCCTGACAGCAT-TGACAATTAT 2591716 Query 18907 ATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCA 18966 || | ||||| | || ||| | ||| |||||||| ||||| ||||| ||| Sbjct 2591715 ATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAAACACGCA 2591656 Query 18967 AAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGC 19026 ||||||||||| |||||||| ||||| || || | ||||| |||||||| | ||| ||| Sbjct 2591655 AAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCGGGC 2591596 Query 19027 ATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCT 19086 |||||||||| ||| || | ||||||||| || ||||| || ||||||||||| || ||| Sbjct 2591595 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCT 2591536 Query 19087 TCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCAT 19146 || ||||||||||| || |||| | |||||||| | || || || | |||||| Sbjct 2591535 TCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATCCAA 2591476 Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206 || |||||||| |||||||| |||||||| ||||||||||| |||| || || || Sbjct 2591475 CACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 2591416 Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | | ||| | | ||||||||| || | ||| || | | |||||||||||| || Sbjct 2591415 AATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTTCAGAG 2591356 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || || ||||| || || ||||| || || || ||||| | |||||||| ||||| ||| Sbjct 2591355 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACT 2591296 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 || | ||| | || ||||| |||||| | ||||| |||||||| ||||| || || Sbjct 2591295 TCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGAAGAAA 2591236 Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA--TGTATTCCAATCATTAA 19444 || | ||||| ||||||| | | || || | | || | | | ||| | | | Sbjct 2591235 GCCAGGACATGGGATATAAAATATCTCTCCTCAG-GTTTCAGGGGCCTCCCAGTGCTGGA 2591177 Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504 | || | || | || || || ||| |||||||||| || ||||| || || ||||||| Sbjct 2591176 TGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACA 2591117 Query 19505 TGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 | | ||| |||||| | |||| || ||||| || ||||| Sbjct 2591116 TCTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAA 2591077 >seq418 Length=2079112 Score = 434 bits (480), Expect = 1e-116 Identities = 663/938 (71%), Gaps = 15/938 (2%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||||| || || | || | || ||| | ||||| Sbjct 761026 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCATGCCCATC 761083 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| || | ||||| || |||||||| |||||||| || || ||||| || Sbjct 761084 CTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 761143 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || |||| || | || | || Sbjct 761144 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATA 761203 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| ||||| ||||||| ||| || ||||| | | || ||||| || || | Sbjct 761204 AGTCTGTCCGCCACAAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 761263 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAAT 18908 || || || | || ||||| || || || |||||||| | ||||| | ||| | | || Sbjct 761264 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTGACTGCAT-TGACAATTAT 761322 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||||| | || ||| | || |||||||| ||||| ||||| ||||| Sbjct 761323 TTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGATGTTTGAACATTAAACACGCAAA 761382 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||||||||| |||||||| ||||| || || | | ||| |||||||| | ||||||||| Sbjct 761383 ATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCAGGCAT 761442 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || ||||| ||| || | ||||||||| || ||||| || |||||| |||| || ||||| Sbjct 761443 CAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATTCCTTC 761502 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 |||||| ||| || ||| ||||||||| | || || || | |||||| Sbjct 761503 CACTGCTCTAAAGGCTCCTACATGTTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAGCG 761562 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||||||| |||||||| ||||||||||| |||| || || || | Sbjct 761563 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAA 761622 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | ||| | | |||||||| | ||| || | | |||||||||||| || || Sbjct 761623 TTCCCTCTCTTTGGAATCTTTAA-----GTATCGATGAGGAGACTGTACATTTCAGAGTG 761677 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || ||||| || || || ||||| || |||||||| ||||| ||||| Sbjct 761678 TATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCTGAACTTC 761737 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||| | || || || |||||||| ||||| |||||||| || || || || || Sbjct 761738 TTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGAAGAAAGC 761797 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT--AATGTATTCCAATCATTAATA 19446 | ||||| ||||||| | | || || ||||| | | | ||| | | || Sbjct 761798 CAGCACATGGGATATAAAATATCTCTC--CTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 761855 Query 19447 TCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATG 19506 || || || | || || || ||| ||||||||| |||||||| ||||| |||||||| Sbjct 761856 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCTTATACATC 761915 Query 19507 TTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544 | ||| |||||| | |||| || ||||| || ||||| Sbjct 761916 TGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953 >seq635 Length=1382696 Score = 205 bits (226), Expect = 1e-47 Identities = 327/466 (70%), Gaps = 9/466 (2%) Strand=Plus/Plus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| | |||| | |||||| ||||| |||||||| ||||| |||| || ||||| Sbjct 1180165 GCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAG 1180224 Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123 ||||||||||| | || || |||| || | ||| || ||||| || || || || Sbjct 1180225 TGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATGTGGATATTCAGTGACTGGCTT 1180284 Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183 |||||||| || |||||||| |||||||||| | | || | || | || ||| Sbjct 1180285 TGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGAACTGTTTTCTGAGAGATTTCC 1180344 Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGAT-TAGTAT--TTTGAATAGAT 47240 || || || ||||| | ||| || | || ||||| | | | |||| | || || ||| Sbjct 1180345 CACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATTTCTGGTATGCTCTGGATGGAT 1180404 Query 47241 CCTCCgttttctataattttgttttttaa---ttcatttgaccaaagttttcgttcagtt 47297 || | |||| | |||||| | |||||| ||| | || |||| Sbjct 1180405 CCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATT---CCATAAGCCCCGCCCAGTA 1180461 Query 47298 aatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTA 47357 | | || | | ||||||||| ||||| ||||||||||| |||| |||||||| | Sbjct 1180462 AGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCCCGATAAGACTCTACGAGTG 1180521 Query 47358 TATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGAT 47417 || ||||| || ||||| ||||| ||||| ||||||||||| | ||| ||||||||||| Sbjct 1180522 TAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCCCAGAATCTGAGCAGTTGAA 1180581 Query 47418 GCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATT 47463 || |||||||| | |||| | ||| || || ||||||||| ||| Sbjct 1180582 GCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCTTACTCCACATT 1180627 >seq34 Length=7729394 Score = 138 bits (152), Expect = 1e-27 Identities = 298/443 (67%), Gaps = 36/443 (8%) Strand=Plus/Minus Query 18936 GTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACT 18995 || ||| |||||||| ||||||||| ||||||| | |||||| |||||||| ||||| Sbjct 4966378 GTGTAGCAGATGTTTGAACATCAAATATGCAAAGTGACAATGGAGTCCCTCATCTCTG-- 4966321 Query 18996 TATCAATTCATTAGAAAA-TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATA 19054 |||||| ||||| ||| | ||||| ||||| || || ||| || || |||||| Sbjct 4966320 ------TTCATTGGAAAAATGTAAGACCAGACATCAATCTTCATTTCTTGAATGAGAATA 4966267 Query 19055 TAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTT 19114 | || ||||| || |||| ||||||||| | ||| | ||||||||||| |||| || Sbjct 4966266 TGGATGCAAAAGAACCAGGAAAGAATATTCTTTCCATAGCTGCAAAAGCTACTACATATT 4966207 Query 19115 CTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA 19174 |||||| | || | |||| | || ||||| || || ||| |||| Sbjct 4966206 CTCCATTTTTGGCCCC--------CAATCAAACACAAGGCCCAGTCTGCTTTC---TTTA 4966158 Query 19175 CACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACAT 19234 ||| | ||||||||| |||| || || | | | | ||| | | |||||||| || Sbjct 4966157 TACAAGACATTGTCTCAATAGTGTTGAAAGGGAATGTCCTCTCTTTGGAATCTTTAA-AT 4966099 Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294 || || | | | | || ||||| ||||| | ||||| | || || | Sbjct 4966098 ----ATTGATGAGGAGATTATATATTTCAGAATGTTTGTTTTCCA--------TGGAAAC 4966051 Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTG-TACTTCACTACAAAATCTTTCGACCAAATTT 19353 | |||||| | | |||||| ||||| ||||| | ||| || ||| ||| Sbjct 4966050 CATAAAAATAGAGGGTTTCTGTAATCTGAAACTTCTTGGCTAAACTACTCTACC--GTTT 4965993 Query 19354 TCATTAACTATTCCATCACTAGC 19376 ||||| ||||| |||||||| || Sbjct 4965992 TCATTCACTATGCCATCACTGGC 4965970 >seq446 Length=2046506 Score = 132 bits (146), Expect = 5e-26 Identities = 111/136 (82%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | ||||| |||||||| | ||||||||||||||||| ||| | Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || ||||| ||||||||||| | Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491 Query 19103 CAACTAGTCTTTCTCC 19118 | |||| | |||||| Sbjct 492490 CTACTACACGTTCTCC 492475 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||||| || || | || | || ||| || ||||| Sbjct 493937 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACGCCCATC 493880 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| |||||||| || || ||||| || Sbjct 493879 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 493820 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 |||||||| ||||||||||| | ||| Sbjct 493819 TCCATAAAGTCAAATGGATTCTCTAC 493794 >seq339 Length=2552696 Score = 127 bits (140), Expect = 2e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| |||| |||||||| | || ||||| || ||||| ||||| ||||| Sbjct 2056695 TGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGAC 2056636 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||| | ||| ||||||||||| || |||||||| | |||| | ||| || Sbjct 2056635 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTG 2056576 Query 47448 TTTCTTACTCCATAT 47462 || |||||||||||| Sbjct 2056575 TTCCTTACTCCATAT 2056561 >seq956 Length=748348 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||||| || || | || | || ||| || |||| Sbjct 286056 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTC--CGTTGAACTTGACATCACGGCCATC 286113 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||| | ||| | ||||| || |||||||| |||||||| || || ||||| || Sbjct 286114 CTCTGAAACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 286173 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || |||| || | || | || Sbjct 286174 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 286233 Query 18790 AGTCTATCCGCTACAAATTTAATATA 18815 ||||| || || || |||| ||| || Sbjct 286234 AGTCTGTCGGCCACGAATTCAATGTA 286259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562068026032920