Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq594 178 2e-39
seq339 100 5e-16
>seq594
Length=1398243
Score = 178 bits (196), Expect = 2e-39
Identities = 185/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| |||| ||||| | || | ||| || ||||| ||| ||||| |||||||||||
Sbjct 999753 AGCAGCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGCTTGAGCTGGGCCACCTGC 999694
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
|| ||||| || || || ||||||| || ||||| || | |||||| ||||||
Sbjct 999693 TCGCGCAGCACCCCGGCCGTGCTGGACAGCCCCGCGTTCTCCGCCTTGAGTGTCTTCACC 999634
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| ||||||||||| |||||||| ||||| || ||| ||||| |||||||| ||||
Sbjct 999633 TTGTCCTCCAGCCGGGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 999574
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
||||| || || | ||| || ||| | |||||||| |||||||| ||||||| ||| ||
Sbjct 999573 CGGTTACGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGG 999514
Query 241625 GAC 241627
|||
Sbjct 999513 GAC 999511
>seq339
Length=2552696
Score = 100 bits (110), Expect = 5e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|||||||| | | || |||||||| ||||||||| |||||| ||||||||||| |||
Sbjct 2045394 GTGTACTCTACAACTTCTGTGCACAGATTGCTGCATTTGATGGTTCCCAGGTTCTGCTGG 2045335
Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647
|| ||| ||| |||||| ||||||||||||||||||| || |||||| |||
Sbjct 2045334 TTGCTCTTCCGATTGCAAGAATCTTTGTAGAGCATGTAGGGGGTGCCCGTCTCTGTCTGA 2045275
Query 213648 GAC 213650
|||
Sbjct 2045274 GAC 2045272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931465228939520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |