Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq170 91.5 2e-13 >seq170 Length=4056410 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || |||||||| |||||||||||||| |||| || | |||||||| | Sbjct 580997 CACCATAAGGTGACCGTGGATAAAAAGGTGTGGTCTCCTTCTGGGGTATTTCTTGCACTT 581056 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||||| | |||||| || || ||||| |||| Sbjct 581057 TCCCATATAATTCACTTGTAGAGGCTTGGTAGA 581089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665446126699960