Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq24 93.3 3e-14
>seq24
Length=8999101
Score = 93.3 bits (102), Expect = 3e-14
Identities = 165/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||| ||||| || || || | || || || ||||| || |||| ||| |
Sbjct 2890729 AAGATGCAGATTTTCGTGAAGACCCTCACTGGGAAGACCATCACGCTCGAGGTCGAGCCC 2890670
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|||||| | | | || ||| ||||| |||||||||||| | || ||
Sbjct 2890669 TCAGATACTATAGAGAATGTGAAAGCCAAGATCCAGGATAAAGAAGGCATTCCTCCTGAC 2890610
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| | || |||| ||| || || |||||||| || | | || || ||||||||
Sbjct 2890609 CAGCAACGTCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCATACTCTGTCGGACTAC 2890550
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792
||||||||||||||||| || | || | || |||||| |||| || || ||| |||
Sbjct 2890549 AACATTCAAAAGGAGTCCACACTTCATCTTGTTTTGAGACTGCGTGGTGGTGCTAAGAAA 2890490
Query 107793 A 107793
|
Sbjct 2890489 A 2890489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398848589812267
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |