Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq692 96.9 3e-15
>seq692
Length=1356280
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 21005 TTTATGTATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCAT 21064
||||||||||| || |||||||| || ||||| ||||| ||||| | | | | |||
Sbjct 23030 TTTATGTATTACGTGAATGATGGAGTGTATGGATCATTTAATTGCATCCTTTATGATCAT 23089
Query 21065 GCTC--GTCCTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTT 21121
|| | ||| | |||| | |||| || ||| | || || || || | |||
Sbjct 23090 GCACACGTC--AAGCCTCTTCTGCAAAAGAGACCCAAACCA-GATGAGAAGTATTATTCA 23146
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| || || ||||| || | || |||||| | ||| | |||||| |||| ||||| ||
Sbjct 23147 TCCAGTATATGGGGACCAACGTGTGATGGCCTTGATCGGATTGTTGAGCGCTGTGACTTG 23206
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAG 21234
|| ||| | || ||||| || ||| | | |||||||||||||| ||||| ||
Sbjct 23207 CCTGAGATGCACGTGGGGGATTGGATGCTCTTTGAAAACATGGGTGCTTATAG 23259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463511975561040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |