Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq163 114 2e-20 >seq163 Length=3864798 Score = 114 bits (126), Expect = 2e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || || |||||||||| |||||||||||| | || || || || ||||||||||| || Sbjct 18375 GCTTTGTGGTGGTACTTTATATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATC 18434 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || ||||| || || || || ||||||||||||| ||| |||||| Sbjct 18435 CTGAGGAAGAAAAACAATCAAGTCTCTTTCCTTCATGTATATCATCATTGTACAATGTTT 18494 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || | | ||| | || ||||| ||| |||||||||| || Sbjct 18495 ACACTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 18535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903345668810080