Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq92 93.3 1e-13 >seq92 Length=5367877 Score = 93.3 bits (102), Expect = 1e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 ||||| || ||| ||| ||||| || ||||||||||| ||||| |||||| |||||| Sbjct 3850793 GTAGCCTTCGCTGCTGTAGAAGGAATTTTCTTTTCAGGATCTTTCGCTGCTATATTTTGG 3850852 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || || || | || | |||||||||||| | || |||||| | ||||| |||||| Sbjct 3850853 CTAAAAAAAAGAGGCCTCATGCCTGGACTCACTTTTTCCAATGAGCTCATCAGCAGAGAT 3850912 Query 131984 GAAG 131987 |||| Sbjct 3850913 GAAG 3850916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186724559355683