Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 1e-12 >seq24 Length=8999101 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || |||||||| ||| || ||| ||| | || || || || || ||| Sbjct 2890642 AAGATCCAGGATAAAGAAGGCATTCCTCCTGACCAGCAACGTCTGATTTTTGCTGGCAAG 2890583 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||||||||| ||| || | || |||||| | || || ||||| || ||||| Sbjct 2890582 CAGCTGGAAGATGGGCATACTCTGTCGGACTACAACATTCAAAAGGAGTCCACACTTCAT 2890523 Query 206374 CTTGTTTTGAGACTTCG 206390 |||||||||||||| || Sbjct 2890522 CTTGTTTTGAGACTGCG 2890506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181732930515563