Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq24 122 8e-23
seq339 95.1 1e-14
>seq24
Length=8999101
Score = 122 bits (134), Expect = 8e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| | |||||| | ||| | | ||||| ||||||||||||||||| || ||
Sbjct 2890505 ACGCAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGAGT 2890564
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
| || |||||| ||||| || || | | | || ||||| || || || ||||| |||||
Sbjct 2890565 ATGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGGAATGCC 2890624
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||||||||| || || ||||| | || | |||||| | ||||| || ||||
Sbjct 2890625 TTCTTTATCCTGGATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGACCTCGAG 2890684
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | || || ||||| || || || | ||||||||||||
Sbjct 2890685 CGTGATGGTCTTCCCAGTGAGGGTCTTCACGAAAATCTGCAT 2890726
>seq339
Length=2552696
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| || | ||| | |||||| ||||||||||| ||| ||||| || ||||| |
Sbjct 2045393 TGTACTCTACAACTTCTGTGCACAGATTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 2045334
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614
|||| ||||||||||| | |||||| |||||||||| || ||| |||||
Sbjct 2045333 TGCTCTTCCGATTGCAAGAATCTTTGTAGAGCATGTAGGGGGTGCCCGTCTC 2045282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476576627815080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |