Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq602 417 1e-111 seq30 407 2e-108 seq418 392 4e-104 seq635 264 2e-65 seq339 136 5e-27 seq446 134 2e-26 seq92 113 6e-20 >seq602 Length=1640730 Score = 417 bits (462), Expect = 1e-111 Identities = 656/935 (70%), Gaps = 12/935 (1%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325 |||| |||||| |||| || | |||| || | | ||| |||||| || ||||| Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAA-GAGTTGCCCGTTGAACTTGACATCACGCCCATC 122164 Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 | | || || || || | ||| || || |||||||||||||||||||| || || Sbjct 122165 CTCTAATACTCGCCTACTC---TCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || ||||| ||||| | | | | ||| | || || | || || Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| || || || ||||| |||| ||||| | |||||||| || ||||| Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || | ||| | ||||| || || ||||| | ||| || || || | ||||| Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | | ||| || || ||| ||| | | |||||| |||||||| || || || Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 |||||||| || ||||||||||| ||||||| | | || |||||||| || |||||||| Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 | || || || |||||||| ||||||| |||||||| | |||||||||||| ||||| Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802 ||||||||||| || || | | ||||| || | | || || | ||||| | | Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640 Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862 |||||||| || ||||||||||||||||||||||| || ||||| || ||||| | Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700 Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922 | | || | || ||||| || ||||| || | ||||| |||||||| || || Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760 Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982 |||||||| || || ||||| || || || ||||| | ||||| ||||| || || ||| Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820 Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042 | ||| | | | |||| ||||||||||||||||||||||| || || ||||| || Sbjct 122821 TGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGCA 122880 Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102 | ||||| ||||||||| | || || ||| ||| | ||||| | ||| || Sbjct 122881 AGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCC 122940 Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || || | || || || |||||||||||||| || ||||| ||||| || ||||| | | Sbjct 122941 TTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTGC 123000 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || |||||| | |||| || ||||| || ||||| Sbjct 123001 CAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035 >seq30 Length=8517879 Score = 407 bits (450), Expect = 2e-108 Identities = 657/939 (70%), Gaps = 13/939 (1%) Strand=Plus/Minus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325 |||| |||||| |||| || | |||| || || ||| |||||| || ||||| Sbjct 2592013 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCACACCCATC 2591955 Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 | || || || || | | |||| || || |||||||||||||||||||| || || Sbjct 2591954 CTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 2591895 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || ||||| ||||| | | | | || | || || | || || Sbjct 2591894 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 2591835 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| || || || ||||| ||||| ||||| | || ||||| || ||||| Sbjct 2591834 AGTCTGTCGGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 2591775 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCT---CTGTTATT 39562 || ||||| | |||| || || ||||| | ||| || || || | | |||| Sbjct 2591774 TTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCTATCCTGACAGCATTGACAATTAT- 2591716 Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || | | ||| || || ||| ||| | | |||||| |||||||| || || Sbjct 2591715 ATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAAACACGCA 2591656 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 || |||||||| || ||||||||||| ||||||| || || |||||||| || || ||| Sbjct 2591655 AAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCGGGC 2591596 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || || || || || |||||||| ||||||| |||||||| |||||||||||||| ||| Sbjct 2591595 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCT 2591536 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799 || ||||||||||| || || | | ||||| | | | || || | ||||| Sbjct 2591535 TCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATCCAA 2591476 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859 | |||||||| || ||||||||||||||||||||||| || ||||| || ||||| Sbjct 2591475 CACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 2591416 Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919 | | | || | ||||||||| || ||||| || | ||||| |||||||| || Sbjct 2591415 AATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTTCAGAG 2591356 Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979 || |||||||| || || ||||| || || || ||||| | ||||| ||||| || || Sbjct 2591355 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACT 2591296 Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039 ||| | ||| | ||| |||| |||||| ||||||| |||||||| || || || || Sbjct 2591295 TCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGAAGAAA 2591236 Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCC-AGTCATTGAT 40098 |||| ||||| ||||||||| | || || ||| ||| ||| ||| | ||| Sbjct 2591235 GCCAGGACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGGCCTCCCAGTGCTGGAT 2591176 Query 40099 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACAT 40158 || | || | || || || |||||||||||||| || ||||| ||||| || ||||| Sbjct 2591175 GTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACAT 2591116 Query 40159 GTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 | ||| |||||| | |||| || ||||| || ||||| Sbjct 2591115 CTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAA 2591077 >seq418 Length=2079112 Score = 392 bits (434), Expect = 4e-104 Identities = 652/938 (70%), Gaps = 19/938 (2%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325 |||| |||||| |||| || | |||| || || ||| |||||| | ||||| Sbjct 761025 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCATGCCCATC 761083 Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 | || || || || || | ||||| || || |||||||||||||||||||| || || Sbjct 761084 CTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 761143 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || ||||| ||||| | | | | || | || || | || || Sbjct 761144 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATA 761203 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| || || |||||||| ||||| ||||| | || ||||| || ||||| Sbjct 761204 AGTCTGTCCGCCACAAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 761263 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| | ||||| || || ||||| | ||| || || || | ||||| Sbjct 761264 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTGACTGCATTGACAATTATT 761323 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | | ||| || || ||| ||| | | |||||| |||||||| || || || Sbjct 761324 TCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGATGTTTGAACATTAAACACGCAAAA 761383 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 |||||||| || ||||||||||| ||||||| | || |||||||| || |||||||| Sbjct 761384 TCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCAGGCATC 761443 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 | || || || || ||||| ||||||| |||||||| |||||| ||||||| ||||| Sbjct 761444 AATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATTCCTTCC 761503 Query 39746 ACTGCTGCAAATGCA---ACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799 |||||| ||| || ||| || ||||| || | | || || | ||||| Sbjct 761504 ACTGCTCTAAAGGCTCCTACATGT---TCTCCATAGGTGGCTTCTTTGTCCCCAATCCAG 761560 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859 | |||||||| || ||||||||||||||||||||||| || ||||| || ||||| Sbjct 761561 CGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 761620 Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919 | | | || | |||||||| ||||| || | ||||| |||||||| || Sbjct 761621 AATTCCCTCTCTTTGGAATCTTTAA-----GTATCGATGAGGAGACTGTACATTTCAGAG 761675 Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979 || |||||||| || || ||||| || || || ||||| || ||||| ||||| || || Sbjct 761676 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCTGAACT 761735 Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039 ||| | ||| | ||| | || |||||||||||||| |||||||| || || || || Sbjct 761736 TCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGAAGAAA 761795 Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATA 40099 |||| ||||| ||||||||| | || || ||| ||| | ||||| | ||| Sbjct 761796 GCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 761855 Query 40100 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATG 40159 || || || | || || || ||||||||||||| || ||||| || || || ||||| Sbjct 761856 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCTTATACATC 761915 Query 40160 TTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 | ||| |||||| | |||| || ||||| || ||||| Sbjct 761916 TGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953 >seq635 Length=1382696 Score = 264 bits (292), Expect = 2e-65 Identities = 346/474 (73%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || || ||||| | | ||| ||| |||| | || ||||||||| || || |||| | Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| |||||||| |||||||| || || ||| || | || || | || Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || ||||||| || || |||||||| |||||||| ||||| || || |||| || | | Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 | | || |||| |||||||| | ||||||| | | || || | ||||||||||| Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383 Query 68614 -CTCGTAT--TTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 || |||| | || ||||||||| | | |||| || || ||||| |||||| Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTA-AGGAGATGCGGATTAACTATTTGAAATTCCCC 68729 || || | | | || || | ||| || | ||| ||||| || || |||||||| || Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502 Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789 ||||| |||||||||||||| ||||| |||||||| ||||| | ||| ||||||||||| Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562 Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 |||||| ||||||||||| ||||| ||||| || || | | |||||| || || Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616 >seq339 Length=2552696 Score = 136 bits (150), Expect = 5e-27 Identities = 110/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| | ||| Sbjct 2056695 TGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGAC 2056636 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||||||| ||||||||||| ||||| ||||| || || | | |||||| Sbjct 2056635 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTG 2056576 Query 68839 TTTCTAAGACCAT 68851 || || | |||| Sbjct 2056575 TTCCTTACTCCAT 2056563 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| |||||||| || || ||| || | || || || || || |||| Sbjct 2059661 TCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGCGATGTGGATAT 2059602 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| || || |||||||| |||||||| ||||| || |||||||| || | || | | Sbjct 2059601 TCAATGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCCGCCATCTTGAGAACTGTTT 2059542 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | |||| |||||||| | ||||||| | | || || | ||||||||||| Sbjct 2059541 TCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAA 2059491 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| || | ||| |||||||| ||||| || || || | || || || ||||| | Sbjct 2031460 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCA 2031401 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 | || ||||||||||| || | ||||| || || ||| |||| ||||| || |||| Sbjct 2031400 GGATGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTAT 2031341 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 | | ||| | ||| ||||| || |||||| || || ||||||||||||| Sbjct 2031340 CCAGTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCATGG 2031290 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 |||||||||||||| ||||| || |||||||| || | ||||| || |||| | | Sbjct 2043619 ACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCGCTGC 2043560 Query 69655 TCTTCATTTCCTGTAttttt-tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 ||||| |||||||||||||| |||||| || || ||||| | || || |||||||||| Sbjct 2043559 TCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCCATGG 2043501 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCG 69743 ||| ||||| || || | | | || ||||| Sbjct 2043500 TTCCAGATAAATAGCAAAGGCCCCAGGTCG 2043471 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 68955 ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTA 69014 ||| |||||||| || || || | || |||||||| || || || || || || || Sbjct 2048234 ATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCATA 2048175 Query 69015 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATA 69074 |||||| ||||| || || | ||||| || || || ||| |||| || || ||||| Sbjct 2048174 ATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGATA 2048115 Query 69075 ATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCT 69134 | | |||||||| ||||||||||| || || ||||| || || || || | || | Sbjct 2048114 CCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGACG 2048055 Query 69135 CTTATTTGA 69143 |||||||| Sbjct 2048054 TTTATTTGA 2048046 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || |||||||| | ||||| || || || |||||||| || ||||| || || ||| Sbjct 2034945 GTACCAGCATTAAAGAGAGTAGGGGAGGCATGGGTGAACCACTTCTCAGAGAGAAGGTTG 2034886 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 |||||||||||||| | || ||||| | |||||||| | | || | ||||||| Sbjct 2034885 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATTCCCACTGAAACCCTCATCAAC 2034826 Query 70111 ATATGCTGAGGTCGTTC 70127 || || || |||| ||| Sbjct 2034825 ATGTGTTGTGGTCTTTC 2034809 Score = 86.0 bits (94), Expect = 9e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| ||| ||||| ||||||||||| ||||||| |||||||| ||||||||||| Sbjct 2044402 ATACAGCTTTTCAAATTCTTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACA 2044343 Query 69567 CATCAATGACCA 69578 |||||| ||||| Sbjct 2044342 CATCAAAGACCA 2044331 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || || || | || |||||| ||| | || | ||| ||||| || || || Sbjct 2039104 AATGTAGCTGCCAGTAGCTCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTT 2039045 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || || ||||| | || | |||||||| ||||| ||||||||||||||| |||| Sbjct 2039044 GGAAATCAGCGCACACTGCTTTAGAGTGTCATAAATACCTTCTATGCTATCATCTTTCAT 2038985 Query 69954 GTTAAGAAGAAAACAGCTA 69972 | | ||||| ||||||||| Sbjct 2038984 GCTGAGAAGGAAACAGCTA 2038966 >seq446 Length=2046506 Score = 134 bits (148), Expect = 2e-26 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||||| || || |||||||| || |||||||| || || || || | Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||||| |||||||| |||||||||||||| ||||| ||||||||||| | Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491 Query 39759 CAAC 39762 | || Sbjct 492490 CTAC 492487 >seq92 Length=5367877 Score = 113 bits (124), Expect = 6e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | || || ||||| |||||||||||||| || || | ||||| Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||||||||| ||||| |||||||| |||||||| || |||||||| || || || || Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGCT 3850795 Query 39761 AC 39762 || Sbjct 3850794 AC 3850793 Score = 89.7 bits (98), Expect = 7e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||||||||||||| || ||||||||||| || |||||||| ||||| | || |||| Sbjct 3842361 CCAAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAA 3842302 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGA 40107 ||||||| ||||| ||||| | || ||||||| | || || ||||| Sbjct 3842301 AATATTTCTCATCCGGTGTAAGCTTGTTCCAGTGAGGGAGGTCCTTTGA 3842253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686858973352920