Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq602 417 1e-111
seq30 407 2e-108
seq418 392 4e-104
seq635 264 2e-65
seq339 136 5e-27
seq446 134 2e-26
seq92 113 6e-20
>seq602
Length=1640730
Score = 417 bits (462), Expect = 1e-111
Identities = 656/935 (70%), Gaps = 12/935 (1%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325
|||| |||||| |||| || | |||| || | | ||| |||||| || |||||
Sbjct 122106 TTTAGAAGTCAGCATCCAAGGTAAAA-GAGTTGCCCGTTGAACTTGACATCACGCCCATC 122164
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
| | || || || || | ||| || || |||||||||||||||||||| || ||
Sbjct 122165 CTCTAATACTCGCCTACTC---TCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 122221
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| || ||||| ||||| | | | | ||| | || || | || ||
Sbjct 122222 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCAGTATA 122281
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||| || || || ||||| |||| ||||| | |||||||| || |||||
Sbjct 122282 AGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGATGAGA 122341
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| | ||| | ||||| || || ||||| | ||| || || || | |||||
Sbjct 122342 TTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGATTATT 122401
Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625
| | ||| || || ||| ||| | | |||||| |||||||| || || ||
Sbjct 122402 TCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACGCAAAA 122460
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685
|||||||| || ||||||||||| ||||||| | | || |||||||| || ||||||||
Sbjct 122461 TCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAGGCATC 122520
Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745
| || || || |||||||| ||||||| |||||||| | |||||||||||| |||||
Sbjct 122521 AATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTCCTTCC 122580
Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802
||||||||||| || || | | ||||| || | | || || | ||||| | |
Sbjct 122581 ACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCCAATGC 122640
Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862
|||||||| || ||||||||||||||||||||||| || ||||| || ||||| |
Sbjct 122641 AAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGGAAT 122700
Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922
| | || | || ||||| || ||||| || | ||||| |||||||| || ||
Sbjct 122701 TCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAGTGT 122760
Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
|||||||| || || ||||| || || || ||||| | ||||| ||||| || || |||
Sbjct 122761 ATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTCT 122820
Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042
| ||| | | | |||| ||||||||||||||||||||||| || || ||||| ||
Sbjct 122821 TGGCTAAACCGCTTCACCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAAAAAGCA 122880
Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102
| ||||| ||||||||| | || || ||| ||| | ||||| | ||| ||
Sbjct 122881 AGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATGTCC 122940
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| || | || || || |||||||||||||| || ||||| ||||| || ||||| | |
Sbjct 122941 TTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACATCTGC 123000
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|| |||||| | |||| || ||||| || |||||
Sbjct 123001 CAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035
>seq30
Length=8517879
Score = 407 bits (450), Expect = 2e-108
Identities = 657/939 (70%), Gaps = 13/939 (1%)
Strand=Plus/Minus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325
|||| |||||| |||| || | |||| || || ||| |||||| || |||||
Sbjct 2592013 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCACACCCATC 2591955
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
| || || || || | | |||| || || |||||||||||||||||||| || ||
Sbjct 2591954 CTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 2591895
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| || ||||| ||||| | | | | || | || || | || ||
Sbjct 2591894 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATG 2591835
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||| || || || ||||| ||||| ||||| | || ||||| || |||||
Sbjct 2591834 AGTCTGTCGGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 2591775
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCT---CTGTTATT 39562
|| ||||| | |||| || || ||||| | ||| || || || | | ||||
Sbjct 2591774 TTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCTATCCTGACAGCATTGACAATTAT- 2591716
Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622
|| | | ||| || || ||| ||| | | |||||| |||||||| || ||
Sbjct 2591715 ATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAAACACGCA 2591656
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
|| |||||||| || ||||||||||| ||||||| || || |||||||| || || |||
Sbjct 2591655 AAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCGGGC 2591596
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|| || || || || |||||||| ||||||| |||||||| |||||||||||||| |||
Sbjct 2591595 ATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCT 2591536
Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799
|| ||||||||||| || || | | ||||| | | | || || | |||||
Sbjct 2591535 TCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATCCAA 2591476
Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859
| |||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct 2591475 CACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 2591416
Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919
| | | || | ||||||||| || ||||| || | ||||| |||||||| ||
Sbjct 2591415 AATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTTCAGAG 2591356
Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979
|| |||||||| || || ||||| || || || ||||| | ||||| ||||| || ||
Sbjct 2591355 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACT 2591296
Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039
||| | ||| | ||| |||| |||||| ||||||| |||||||| || || || ||
Sbjct 2591295 TCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGAAGAAA 2591236
Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCC-AGTCATTGAT 40098
|||| ||||| ||||||||| | || || ||| ||| ||| ||| | |||
Sbjct 2591235 GCCAGGACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGGCCTCCCAGTGCTGGAT 2591176
Query 40099 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACAT 40158
|| | || | || || || |||||||||||||| || ||||| ||||| || |||||
Sbjct 2591175 GTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATACAT 2591116
Query 40159 GTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
| ||| |||||| | |||| || ||||| || |||||
Sbjct 2591115 CTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAA 2591077
>seq418
Length=2079112
Score = 392 bits (434), Expect = 4e-104
Identities = 652/938 (70%), Gaps = 19/938 (2%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATT 39325
|||| |||||| |||| || | |||| || || ||| |||||| | |||||
Sbjct 761025 TTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCATGCCCATC 761083
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
| || || || || || | ||||| || || |||||||||||||||||||| || ||
Sbjct 761084 CTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAATGTTC 761143
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| || ||||| ||||| | | | | || | || || | || ||
Sbjct 761144 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCAGTATA 761203
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| ||| || || |||||||| ||||| ||||| | || ||||| || |||||
Sbjct 761204 AGTCTGTCCGCCACAAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGATGAGA 761263
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||||| | ||||| || || ||||| | ||| || || || | |||||
Sbjct 761264 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTGACTGCATTGACAATTATT 761323
Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625
| | ||| || || ||| ||| | | |||||| |||||||| || || ||
Sbjct 761324 TCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGATGTTTGAACATTAAACACGCAAAA 761383
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685
|||||||| || ||||||||||| ||||||| | || |||||||| || ||||||||
Sbjct 761384 TCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCAGGCATC 761443
Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745
| || || || || ||||| ||||||| |||||||| |||||| ||||||| |||||
Sbjct 761444 AATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATTCCTTCC 761503
Query 39746 ACTGCTGCAAATGCA---ACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799
|||||| ||| || ||| || ||||| || | | || || | |||||
Sbjct 761504 ACTGCTCTAAAGGCTCCTACATGT---TCTCCATAGGTGGCTTCTTTGTCCCCAATCCAG 761560
Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 39859
| |||||||| || ||||||||||||||||||||||| || ||||| || |||||
Sbjct 761561 CGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGG 761620
Query 39860 TAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAA 39919
| | | || | |||||||| ||||| || | ||||| |||||||| ||
Sbjct 761621 AATTCCCTCTCTTTGGAATCTTTAA-----GTATCGATGAGGAGACTGTACATTTCAGAG 761675
Query 39920 TGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC 39979
|| |||||||| || || ||||| || || || ||||| || ||||| ||||| || ||
Sbjct 761676 TGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCTGAACT 761735
Query 39980 TCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039
||| | ||| | ||| | || |||||||||||||| |||||||| || || || ||
Sbjct 761736 TCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGAAGAAA 761795
Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATA 40099
|||| ||||| ||||||||| | || || ||| ||| | ||||| | |||
Sbjct 761796 GCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGGATG 761855
Query 40100 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATG 40159
|| || || | || || || ||||||||||||| || ||||| || || || |||||
Sbjct 761856 TCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCTTATACATC 761915
Query 40160 TTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
| ||| |||||| | |||| || ||||| || |||||
Sbjct 761916 TGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953
>seq635
Length=1382696
Score = 264 bits (292), Expect = 2e-65
Identities = 346/474 (73%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| || || ||||| | | ||| ||| |||| | || ||||||||| || || |||| |
Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| |||||||| |||||||| || || ||| || | || || | ||
Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|| ||||||| || || |||||||| |||||||| ||||| || || |||| || | |
Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
| | || |||| |||||||| | ||||||| | | || || | |||||||||||
Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383
Query 68614 -CTCGTAT--TTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
|| |||| | || ||||||||| | | |||| || || ||||| ||||||
Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTA-AGGAGATGCGGATTAACTATTTGAAATTCCCC 68729
|| || | | | || || | ||| || | ||| ||||| || || |||||||| ||
Sbjct 1180444 CATAAGCCCCGCCCAGT-AAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502
Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789
||||| |||||||||||||| ||||| |||||||| ||||| | ||| |||||||||||
Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562
Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843
|||||| ||||||||||| ||||| ||||| || || | | |||||| || ||
Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616
>seq339
Length=2552696
Score = 136 bits (150), Expect = 5e-27
Identities = 110/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| | |||
Sbjct 2056695 TGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGAC 2056636
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||||||||||||||| ||||||||||| ||||| ||||| || || | | ||||||
Sbjct 2056635 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTG 2056576
Query 68839 TTTCTAAGACCAT 68851
|| || | ||||
Sbjct 2056575 TTCCTTACTCCAT 2056563
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| |||||||| |||||||| || || ||| || | || || || || || ||||
Sbjct 2059661 TCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGCGATGTGGATAT 2059602
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
||| || || |||||||| |||||||| ||||| || |||||||| || | || | |
Sbjct 2059601 TCAATGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCCGCCATCTTGAGAACTGTTT 2059542
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611
| |||| |||||||| | ||||||| | | || || | |||||||||||
Sbjct 2059541 TCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAA 2059491
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390
|| |||| || | ||| |||||||| ||||| || || || | || || || ||||| |
Sbjct 2031460 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCA 2031401
Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450
| || ||||||||||| || | ||||| || || ||| |||| ||||| || ||||
Sbjct 2031400 GGATGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTAT 2031341
Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
| | ||| | ||| ||||| || |||||| || || |||||||||||||
Sbjct 2031340 CCAGTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCATGG 2031290
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|||||||||||||| ||||| || |||||||| || | ||||| || |||| | |
Sbjct 2043619 ACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCGCTGC 2043560
Query 69655 TCTTCATTTCCTGTAttttt-tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713
||||| |||||||||||||| |||||| || || ||||| | || || ||||||||||
Sbjct 2043559 TCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCCATGG 2043501
Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCG 69743
||| ||||| || || | | | || |||||
Sbjct 2043500 TTCCAGATAAATAGCAAAGGCCCCAGGTCG 2043471
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 68955 ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTA 69014
||| |||||||| || || || | || |||||||| || || || || || || ||
Sbjct 2048234 ATAGGTTTCATATGGGCCCAGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAGGCTCCATA 2048175
Query 69015 ATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATA 69074
|||||| ||||| || || | ||||| || || || ||| |||| || || |||||
Sbjct 2048174 ATAAATGGTTTCAAAGATTTGTTTATTCAGTAACTGGGCCTCTGGACTTTCAAAAGGATA 2048115
Query 69075 ATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCT 69134
| | |||||||| ||||||||||| || || ||||| || || || || | || |
Sbjct 2048114 CCGCATGAGAATAAAAGCATCTGCCAAACCTTGTACCCCGATTCCAATGGGGCGGTGACG 2048055
Query 69135 CTTATTTGA 69143
||||||||
Sbjct 2048054 TTTATTTGA 2048046
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || |||||||| | ||||| || || || |||||||| || ||||| || || |||
Sbjct 2034945 GTACCAGCATTAAAGAGAGTAGGGGAGGCATGGGTGAACCACTTCTCAGAGAGAAGGTTG 2034886
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|||||||||||||| | || ||||| | |||||||| | | || | |||||||
Sbjct 2034885 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATTCCCACTGAAACCCTCATCAAC 2034826
Query 70111 ATATGCTGAGGTCGTTC 70127
|| || || |||| |||
Sbjct 2034825 ATGTGTTGTGGTCTTTC 2034809
Score = 86.0 bits (94), Expect = 9e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| ||| ||||| ||||||||||| ||||||| |||||||| |||||||||||
Sbjct 2044402 ATACAGCTTTTCAAATTCTTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACA 2044343
Query 69567 CATCAATGACCA 69578
|||||| |||||
Sbjct 2044342 CATCAAAGACCA 2044331
Score = 84.2 bits (92), Expect = 3e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893
||| || || || | || |||||| ||| | || | ||| ||||| || || ||
Sbjct 2039104 AATGTAGCTGCCAGTAGCTCGAATACAACTCACAGCAACACCAATTCCCCCAGCAGACTT 2039045
Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953
|| || || ||||| | || | |||||||| ||||| ||||||||||||||| ||||
Sbjct 2039044 GGAAATCAGCGCACACTGCTTTAGAGTGTCATAAATACCTTCTATGCTATCATCTTTCAT 2038985
Query 69954 GTTAAGAAGAAAACAGCTA 69972
| | ||||| |||||||||
Sbjct 2038984 GCTGAGAAGGAAACAGCTA 2038966
>seq446
Length=2046506
Score = 134 bits (148), Expect = 2e-26
Identities = 104/124 (84%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||||| || || |||||||| || |||||||| || || || || |
Sbjct 492610 CCTCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 492551
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||||| |||||||| |||||||||||||| ||||| ||||||||||| |
Sbjct 492550 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 492491
Query 39759 CAAC 39762
| ||
Sbjct 492490 CTAC 492487
>seq92
Length=5367877
Score = 113 bits (124), Expect = 6e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | || || ||||| |||||||||||||| || || | |||||
Sbjct 3850914 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTTTT 3850855
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||||||||| ||||| |||||||| |||||||| || |||||||| || || || ||
Sbjct 3850854 AGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGGCT 3850795
Query 39761 AC 39762
||
Sbjct 3850794 AC 3850793
Score = 89.7 bits (98), Expect = 7e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058
||||||||||||| || ||||||||||| || |||||||| ||||| | || ||||
Sbjct 3842361 CCAAATTTTCATTTACGATTCCATCACTGGCTGCAAAAAAGGCCAAGATGTGAGAGATAA 3842302
Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGA 40107
||||||| ||||| ||||| | || ||||||| | || || |||||
Sbjct 3842301 AATATTTCTCATCCGGTGTAAGCTTGTTCCAGTGAGGGAGGTCCTTTGA 3842253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686858973352920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |