Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq602 333 2e-86
seq30 324 1e-83
seq418 316 2e-81
seq446 116 3e-21
seq92 98.7 8e-16
seq349 89.7 4e-13
seq94 84.2 2e-11
seq956 82.4 6e-11
>seq602
Length=1640730
Score = 333 bits (368), Expect = 2e-86
Identities = 618/895 (69%), Gaps = 18/895 (2%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | ||||| || |||| ||||| || ||||| ||||| || || || ||||
Sbjct 123035 TTTGTCATCTTTCCCATCAAATACCATGATATCTGGCAGATGTATAAGAAGGCCGAGGCC 122976
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817
|||||||||||||| || || || || | | || ||| | ||||| ||| ||
Sbjct 122975 TCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCAC--TGGGAGGCCC 122918
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
| ||||| | || | | |||||||||| || | || ||||| || || || || |
Sbjct 122917 TGAAACCTGAGGAGAGATATTTTATATCCCATGTGCTTGCTTTTTTCGCGGCCAGTGATG 122858
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| ||||| |||||||| ||||| | |||||| ||||||||||| ||||| ||||||
Sbjct 122857 GAATAGTGAATGAAAACTTGGTGAAGCGGTTTAGCCAAGAAGTTCAGATTAC-AGAAGCC 122799
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
| ||||| ||||| || || |||||||| ||||| || || || ||||||||||||||
Sbjct 122798 TGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTC 122739
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| || ||||| ||||| ||| || | |||| | | | || || || || ||
Sbjct 122738 CTCATCGATACTTACATTAAACATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG 122679
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | ||| | || | || ||||| |||||| | | ||||| | | |
Sbjct 122678 ACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGATTGGGGACAAAGAA 122619
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||||||| | | || || ||||||| |||||||| || |||||||| |
Sbjct 122618 GCCACCTATGGAGAATGTGTAGTAGCCTTTGCAGCAGTGGAAGGAATCTTCTTTTCTAGT 122559
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| ||||||| ||| | ||||||||||| ||||||||||| | || |||||
Sbjct 122558 TCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGATTGATGCCTGGTCTTACATTTTCG 122499
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|||| |||| || | ||||| || | ||||| |||||||| || || | | |
Sbjct 122498 AATGCACTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTG-TTAATGTTCAAA 122440
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
|||| | || |||| ||||| ||| | | | ||| || | || | || ||
Sbjct 122439 CATCT--GCTAC-ATAAACCTTCGGAGCAGAGAGTCAGAGAAATAATCGTCAATGCTGTC 122383
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
| ||||||||| || || | ||| || || || ||||| | || || ||||| ||
Sbjct 122382 AGGATAGAACAGGAGTTCCTTACAGAGGCCTTGCCAATAAATCTCATCGGGATGAATTGC 122323
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
|| ||| ||||| || || | ||||| | | || || | | | |||| ||||| |
Sbjct 122322 AC-TTTAATGAAGCAGTACACTGAATTCGTGGCGGACAGACTTATACTGGAGCTGGGCTT 122264
Query 44473 CGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532
| ||| | | ||| | || || ||||| |||||||| || ||||| ||||||||
Sbjct 122263 CAGCAAAGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAAGG 122204
Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
|||||| ||||| ||| || | || || || ||| || | |||||||| |||
Sbjct 122203 CAAAACTAACTTCTTT---AAGAGAGTAGGCGAGTATTAGAGGATGGGCGTGATG 122152
>seq30
Length=8517879
Score = 324 bits (358), Expect = 1e-83
Identities = 654/958 (68%), Gaps = 18/958 (2%)
Strand=Plus/Plus
Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743
|||||| || | | |||||| | ||||| || |||| ||||| || ||||| |||||
Sbjct 2591061 AGAAAACCCCCGTCGCTTTGTCATCTTTCCCATCGAATACCATGATATCTGGCAGATGTA 2591120
Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--A 43801
|| || || |||| |||||||||||||| || || || || | | | ||| | |
Sbjct 2591121 TAAGAAGGCCGAGGCCTCATTTTGGACAGCTGAGGAGGTGGACCTTTCCAGGGACATCCA 2591180
Query 43802 GCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTT 43861
|||| | ||| | | ||||| | || | | |||||||||| || |||| ||
Sbjct 2591181 GCAC-TGGGAGGCCCCTGAAACCTGAGGAGAGATATTTTATATCCCATGTCCTGGCTTTC 2591239
Query 43862 TTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTT 43921
|| || || || || || ||||| | |||||| ||||| |||||| |||||||||
Sbjct 2591240 TTCGCAGCCAGTGATGGCATAGTGAGTGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTT 2591299
Query 43922 CA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTC 43980
|| ||||| |||||| | ||||| ||||| || || |||||||| ||||| || || ||
Sbjct 2591300 CAGATTAC-AGAAGCCTGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTC 2591358
Query 43981 GGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATT 44040
|||||||||||||| || || ||||| ||| | |||||| | |||| | | |
Sbjct 2591359 TGAAATGTACAGTCTCCTCATCGATACTTACGTTAAAGATTCCAAAGAGAGGGAATTCCT 2591418
Query 44041 GTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATG 44100
|| || || || || ||| | ||| | || | || ||||| |||||| | ||
Sbjct 2591419 CTTCAACGCTATTGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGTGTTG 2591478
Query 44101 GATAAATTCAAATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGG 44157
||| || || | ||||||| | | || || ||||||| || |||||
Sbjct 2591479 GATTGGGGACAAAGAAGCCACCCATGGAGAATGTGTAGTAGCCTTTGCAGCAGTTGAAGG 2591538
Query 44158 CATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCC 44217
|| |||||||| || || ||||| ||||||| ||| | ||||||||||| |||||||
Sbjct 2591539 AATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGACTGATGCC 2591598
Query 44218 TGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGC 44277
|| | || ||||| |||||| |||| || | ||||| || | ||||| ||||||||
Sbjct 2591599 CGGTCTTACATTTTCGAATGAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGC 2591658
Query 44278 TTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG--AT 44335
|| || | | | |||| | || |||| ||||| ||| | | | || ||
Sbjct 2591659 GTGTTTAATGTTCAAACATCT--GCTAC-ATAAACCTTCGGAGCAGAGAGTCAGAGAAAT 2591715
Query 44336 ATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAAT 44395
|| |||| | || || | ||||||||| || || | |||| || || || || |||
Sbjct 2591716 ATAATTGTCAATGCTGTCAGGATAGAACAGGAGTTCCTCACAAAGGCCTTGCCAGTGAAT 2591775
Query 44396 TTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTT 44454
| || || ||||| || || ||| ||||| || || ||||||| | | || || | |
Sbjct 2591776 CTCATCGGGATGAACTGCAC-TTTAATGAAGCAGTACATTGAATTCGTGGCCGACAGACT 2591834
Query 44455 ACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGA 44514
| |||| ||||| | | || | | ||| | || || ||||| ||||||||
Sbjct 2591835 CATACTGGAGCTGGGCTTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGA 2591894
Query 44515 AAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCG 44574
|| ||||| |||||||||||||| ||||| ||| | || | | || || |||||| |
Sbjct 2591895 GAACATTTCATTGGAAGGCAAAACTAACTTCTTTAAGAAGAGACTAGGCGAGTATCAGAG 2591954
Query 44575 AATGGGCGTCATGATAA---CAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629
||||| || ||| || ||| ||||| ||||| ||||| || ||||||
Sbjct 2591955 GATGGGTGTGATGTCAAGTTCAACGGACAACTCTTTTACCTTGGATGCTGACTTCTAA 2592012
>seq418
Length=2079112
Score = 316 bits (350), Expect = 2e-81
Identities = 642/942 (68%), Gaps = 26/942 (3%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | ||||| || |||| ||||| || ||||| ||||| || ||||| ||||
Sbjct 761953 TTTGTCATCTTTCCCATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCCGAGGCT 761894
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817
||| |||||||||| || || || || | | || ||| | ||||| ||| ||
Sbjct 761893 TCACTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATCCAGCAC--TGGGAGGCCC 761836
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
| ||||| | || | | |||||||||| || |||| || || || || || || |
Sbjct 761835 TGAAACCTGAGGAGAGATATTTTATATCCCATGTGCTGGCTTTCTTCGCGGCCAGTGATG 761776
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| ||||| |||||||| || || |||||| ||||||||||| ||||| ||||||
Sbjct 761775 GCATAGTGAATGAAAACTTTGTGGAGCGGTTTAGCCAAGAAGTTCAGATTAC-AGAAGCC 761717
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
| ||||| ||||| || || |||||||| ||||| || || || ||||||||||||||
Sbjct 761716 AGCTGTTTCTATGGCTTCCAGATTGCCATGGAAAACATACACTCTGAAATGTACAGTCTC 761657
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| || ||||| | |||||| | |||| | | | || || || || ||
Sbjct 761656 CTCATCGATAC-----TTAAAGATTCCAAAGAGAGGGAATTCCTCTTCAACGCTATTGAG 761602
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | ||| | || | || ||||| |||||| | ||||| | | |
Sbjct 761601 ACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAA 761542
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | |||||||| | | || ||| || |||||||| || |||| ||| ||
Sbjct 761541 GCCACCTATGGAGAACATGTAGGAGCCTTTAGAGCAGTGGAAGGAATCTTCTATTCTGGT 761482
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| ||||||| ||| | ||||||||||| ||||||||||| | || |||||
Sbjct 761481 TCTTTTGCATCCATATTCTGGCTTAAGAAACGAGGATTGATGCCTGGTCTTACATTTTCG 761422
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||| || |||| || | ||||| || | ||||| |||||||| || || | | |
Sbjct 761421 AATAAGCTAATTAGCAGAGATGAGGGACTCCATTGTGATTTTGCGTGTTTAATGTTCAAA 761362
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTA--AGACAATTACAGATATTGTTGTAGAGGCAG 44351
|||| | | |||| |||| || | ||| | | | ||| || |||| | ||||
Sbjct 761361 CATCTGGTA---CATAAACCTT--TGGAGCAGAGAGTCAGAGAAATAATTGTCAATGCAG 761307
Query 44352 TAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-T 44410
| | ||||||||| || || | ||| || || || || ||| | || || ||||| |
Sbjct 761306 TCAGGATAGAACAGGAGTTCCTCACAGAGGCCTTGCCAGTGAATCTCATCGGGATGAACT 761247
Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470
| || ||| ||||| || || ||||||| | || || | | | |||| |||||
Sbjct 761246 GCAC-TTTAATGAAGCAGTACATTGAATTTGTGGCGGACAGACTTATACTGGAGCTGGGC 761188
Query 44471 TGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530
| | || | | ||| | || || ||||| |||||||| || ||||| ||||||
Sbjct 761187 TTCAGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAA 761128
Query 44531 GGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATA 44590
|||||||| ||||| ||||| || | || || || |||||| | |||||| | ||| |
Sbjct 761127 GGCAAAACTAACTTCTTTGAGAAGAGAGTAGGGGAGTATCAGAGGATGGGCATGATGTCA 761068
Query 44591 A---CAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629
| ||| ||||| ||||| ||||| || ||||||
Sbjct 761067 AGTTCAACGGACAACTCTTTTACCTTGGATGCTGACTTCTAA 761026
>seq446
Length=2046506
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|||||||| | || || ||||||| |||||||| || |||||||| || || |||||
Sbjct 492475 GGAGAACGTGTAGTAGCCTTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 492534
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
||||||| ||| | ||||||||||| |||||||||| | || |||||||||||| ||
Sbjct 492535 TCCATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGTCTTACATTTTCAAATGAGCTA 492594
Query 44243 ATAAGTCGTGATGA 44256
|| || | |||||
Sbjct 492595 ATTAGCAGAGATGA 492608
Score = 111 bits (122), Expect = 1e-19
Identities = 97/118 (82%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| ||||||||||| |||| ||||||| || ||||| ||||| || || |||||
Sbjct 489402 CGGTTTAGCCAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTATGGCTTCCAGATTGC 489460
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || || || |||||||||||||| || || ||||| ||||| ||||||
Sbjct 489461 CATGGAAAACATACACTCTGAAATGTACAGTCTCCTCATCGATACTTACATTAAAGAT 489518
Score = 91.5 bits (100), Expect = 1e-13
Identities = 107/144 (74%), Gaps = 3/144 (2%)
Strand=Plus/Plus
Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548
||| | || || ||||| |||||||| || ||||| |||||||||||||| ||||| |||
Sbjct 493794 GTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAAGGCAAAACTAACTTCTTT 493853
Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAATAAA 44605
|| || | || || || |||||| | |||||||| ||| || ||| |||||
Sbjct 493854 GAGAAGAGAGTAGGCGAGTATCAGAGGATGGGCGTGATGTCAAGTTCAACGGACAACTCT 493913
Query 44606 TTTACTACGGATGAAGATTTCTAA 44629
||||| ||||| || ||||||
Sbjct 493914 TTTACCTTGGATGCTGACTTCTAA 493937
>seq92
Length=5367877
Score = 98.7 bits (108), Expect = 8e-16
Identities = 96/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || || || | ||| ||||| ||||||||||||||||| || || || |||||||||
Sbjct 3850793 GTAGCCTTCGCTGCTGTAGAAGGAATTTTCTTTTCAGGATCTTTCGCTGCTATATTTTGG 3850852
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
|||| ||| |||| | |||||||| | || ||||| |||||| | || || | |||
Sbjct 3850853 CTAAAAAAAAGAGGCCTCATGCCTGGACTCACTTTTTCCAATGAGCTCATCAGCAGAGAT 3850912
Query 44255 GAAG 44258
||||
Sbjct 3850913 GAAG 3850916
Score = 95.1 bits (104), Expect = 1e-14
Identities = 104/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554
||||| ||||| ||||||||||| ||||| || ||||| |||||||| || ||||| |||
Sbjct 3880548 AACCCATTTGACTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGAAA 3880607
Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAGTGACAATAA---ATTTACT 44611
|| ||| ||| |||||||| | | ||||||| | ||||| |||| || ||
Sbjct 3880608 CGAGTTTCAGAGTATCAGCGTTTTGCAGTCATGACAGAAAGTGCAGATAACGTCTTCACC 3880667
Query 44612 ACGGATGAAGATTTCTAA 44629
||||| |||||| |||
Sbjct 3880668 TTGGATGCAGATTTTTAA 3880685
>seq349
Length=2296957
Score = 89.7 bits (98), Expect = 4e-13
Identities = 272/417 (65%), Gaps = 4/417 (1%)
Strand=Plus/Plus
Query 77246 CCCTCTCGTGCCAGCCGGTCGGCCTCCTCATTGCCTTTGTATCCTGCGTGTCCTGGGATG 77305
|| |||| ||| | | ||| | || ||||||||| | ||||| || || | ||
Sbjct 1589060 CCTTCTCTTGCGAATCTGTCCTCTTCTTCATTGCCTCTAAATCCTAAATGACCGCGACTG 1589119
Query 77306 TGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTG 77365
|||| ||| || |||| || | |||| |||||| || |||||| || ||
Sbjct 1589120 TGCATCCACTGAATGTCCATACCCTGGATAAGTTTCTCCAGCCGCACAAAGTCTTCTCTG 1589179
Query 77366 TTGACAACTGACCCTCCGCCATGC-AGC-CTCCAGCCGTTCTGCTTCCAGTTCTTAACCC 77423
|||| | | | | | | ||| || ||||| || || | |||||| | | |||||
Sbjct 1589180 TTGATCAT--ATCTTTCCCTGTGCTAGTTCTCCACCCATTTTTCTTCCAACTTTGAACCC 1589237
Query 77424 ACTTAGTCACACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTT 77483
| | | | |||||| || || ||||| ||||| | || | ||||| || ||||| |
Sbjct 1589238 AACTGCTGATACCATTTATTGTAAACATACTGTCCATATAAAGAACCAGATTATTGATAT 1589297
Query 77484 TGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCAGCCTGGATTTCAGCGCGCTGGTTTG 77543
| | ||| | ||||| | |||||| | || || || ||||| || | |||||||
Sbjct 1589298 TTTAAGCCTTTGTTTGTTTGATGGCTTTGCAGGCTGCATGAATTTCTGCTCTTTGGTTTG 1589357
Query 77544 TCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCGGGTGATTATAACCCCAATATACGC 77603
|||||||||| ||||| | ||||| | || || | ||||| | || |
Sbjct 1589358 TCTGTTGCCCAGGAAGTCTAATGCCTACATTTAAAGGATGGCCAGGCCCCCAGCACACAC 1589417
Query 77604 CAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGATAAGCAACAGCCGTCAGTGTAGA 77660
|||| || ||||| || | || || || || |||||||| | ||||| ||||
Sbjct 1589418 CAATTCCTGCTCGAGCCTTCTTGTGCCCATTACTGGAGCAACAGTCATCAGTATAGA 1589474
>seq94
Length=5279227
Score = 84.2 bits (92), Expect = 2e-11
Identities = 74/90 (82%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 77866 TCTGACAAACGCCCAGGCATCTTGCTCTGTTGCAAACTTCTTAAATACGGCTGCTGGGAA 77925
||||||||| | |||||| |||| |||||| ||||||||||||||| ||| || || ||
Sbjct 1235474 TCTGACAAAGGTCCAGGCCTCTTCCTCTGTGGCAAACTTCTTAAATCTGGCAGCAGGAAA 1235415
Query 77926 TTTGTCTACTT-GGCTCTTACATTCATCCC 77954
| ||| |||| ||||| ||||||||| ||
Sbjct 1235414 TCGGTCCACTTGGGCTC-TACATTCATTCC 1235386
>seq956
Length=748348
Score = 82.4 bits (90), Expect = 6e-11
Identities = 105/144 (73%), Gaps = 3/144 (2%)
Strand=Plus/Minus
Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548
||| | || || ||||| |||||||| || ||||| |||||||||||||| ||||| |||
Sbjct 286199 GTAGAGAATCCATTTGACTTTATGGAGAACATTTCATTGGAAGGCAAAACTAACTTCTTT 286140
Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAA---CAAGTGACAATAAA 44605
|| || | || || || | |||| | |||| ||| ||| || ||| |||||
Sbjct 286139 GAGAAGAGAGTAGGCGAGTTTCAGAGGATGGCCGTGATGTCAAGTTCAACGGACAACTCT 286080
Query 44606 TTTACTACGGATGAAGATTTCTAA 44629
||||| ||||| || ||||||
Sbjct 286079 TTTACCTTGGATGCTGACTTCTAA 286056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397427890297015
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