Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq339 91.5 2e-13
>seq339
Length=2552696
Score = 91.5 bits (100), Expect = 2e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||||||| || |||||| || | ||| | || || || ||
Sbjct 2045407 CTCATCTTTGCTGGTGTACTCTACAACTTCTGTGCACAGATTGCTGCATTTGATGGTTCC 2045348
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| |||| ||||| |||||| ||||| | ||| ||||||||||||||||| || ||
Sbjct 2045347 CAGGTTCTGCTGGTTGCTCTTCCGATTGCAAGAATCTTTGTAGAGCATGTAGGGGGTGCC 2045288
Query 111385 CGTCTCCGTCTGTGA 111399
|||||| ||||| ||
Sbjct 2045287 CGTCTCTGTCTGAGA 2045273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627986444128800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |