Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq409 212 2e-49 seq24 190 6e-43 seq602 158 4e-33 seq556 149 2e-30 seq418 132 1e-25 seq802 131 5e-25 seq30 127 6e-24 seq501 125 2e-23 seq951 114 4e-20 seq42 111 5e-19 seq608 100 9e-16 seq21 98.7 3e-15 seq703 84.2 7e-11 >seq409 Length=2050159 Score = 212 bits (234), Expect = 2e-49 Identities = 379/546 (69%), Gaps = 12/546 (2%) Strand=Plus/Plus Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 |||| | || || ||||| || || || || ||||||||||| ||| | || || |||| Sbjct 859890 AAATGTGCTGATCTTTGACTTGGGAGGAGGCACTTTTGATGTGTCAATTCTCACTATTGA 859949 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 ||| || || |||||||| ||| | || || || || || || | ||||||||||| || Sbjct 859950 AGATGGGATCTTTGAAGTCAAATCTACAGCAGGAGACACCCACTTGGGTGGAGAAGACTT 860009 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943 ||| ||||| | || |||||| || |||||| || || ||||| || | || | Sbjct 860010 TGACAATCGAATGGTCAACCATTTTATTGCAGAATTCAAACG-CAAGCACAAGAAGGACA 860068 Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003 | | || || || || | || |||||| | ||||| ||||||||||| |||||| Sbjct 860069 TAAGTGAGAACAAGAGGGCTGTCCGCCGCCTACGTACTGCTTGTGAACGTGCAAAGCGTA 860128 Query 350004 CCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT 350063 | | || || | ||||| || ||||||||||||||| || ||| || | |||| Sbjct 860129 CACTCTCTTCCAGCACCCAGGCCAGTATTGAAATTGATTCCCTGTATGAAGGAATTGATT 860188 Query 350064 TCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGC 350121 ||| | || ||||| || || || |||||||||| || ||| || | || | | Sbjct 860189 TCTACACCTCCATTACCCGGGCCCGATTTGAAGAAT--TGAATGCTGACTTGTTCCGTGG 860246 Query 350122 AACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGA 350181 || ||||||| || ||||||| | ||||| || | |||| |||||| | Sbjct 860247 CACCCTGGATCCAGTAGAAAAAGCCCTTCGGGATGCCAAGCTTGACAAATCCCAGATTCA 860306 Query 350182 TGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGA 350241 ||| | || || || ||||||||||| ||||| || || |||| || | || || Sbjct 860307 TGACATTGTCTTGGTGGGTGGTTCTACTCGTATCCCCAAGATTCAGAAGCTTTTACAGGA 860366 Query 350242 GTTTTTTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATA 350298 || || ||||| |||||| || | ||| | || || || ||||| ||||| || || Sbjct 860367 CTTCTTCAATGGGAAAGAA--TTGAACAAGAGC-ATCAACCCTGATGAGGCTGTGGCTTA 860423 Query 350299 TGGTGC 350304 |||||| Sbjct 860424 TGGTGC 860429 Score = 138 bits (152), Expect = 3e-27 Identities = 355/535 (66%), Gaps = 12/535 (2%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320 |||||||||| || ||||| ||||| ||||| || | | | | |||||||| ||||| Sbjct 860431 CTGCACCATAAGCCACAGCCTCATCAGGGTTGAT-GCTCTTGTTCAATTCTTTCCCATTG 860373 Query 183321 AAAAATTC---TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAAT 183377 || || || | ||||| | || ||| || || || | ||| |||||||| || || Sbjct 860372 AAGAAGTCCTGTAAAAGCTTCTG---AATCTTGGGGATACGAGTAGAACCACCCACCAAG 860316 Query 183378 ACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGG 183437 || | |||| || | ||| || | | ||| | ||||||| || || Sbjct 860315 ACAATGTCATGAATCTGGGATTTGTCAAGCTTGGCATCCCGAAGGGCTTTTTCTACTGGA 860256 Query 183438 TCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGAT 183497 |||| || | || || || | || ||||| |||| || | || | || Sbjct 860255 TCCAGGGTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCGGGCCCGGGTAATGGAG 860196 Query 183498 GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGAT 183557 | | || ||||| || | ||| | ||||||||||||||| | || || || Sbjct 860195 GTGTAGAAATCAATTCCTTCATACAGGGAATCAATTTCAATACTGGCCTGGGTGCTGGAA 860136 Query 183558 GATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATG--ATCTTGGAT 183615 || | ||| | || || |||||||| || || | ||| || || | | ||||| | Sbjct 860135 GAGAGTGTACGCTTTGCACGTTCACAAGCAGTACGTAGGCGGCGGACAGCCCTCTTG--T 860078 Query 183616 TATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATC 183675 | || | || || | || || || | ||| ||||| | ||||||||| | | | || Sbjct 860077 TCTCACTTATGTCCTTCTTGTGCTTGCGTTTGAATTCTGCAATAAAATGGTTGACCATTC 860018 Query 183676 TTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATA 183735 | ||||| ||||| ||||| || || || || || || |||| ||| |||||||| | Sbjct 860017 GATTGTCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCTGCTGTAGATTTGACTTCAAAGA 859958 Query 183736 TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | || ||||||||| | | |||||| |||||||| || || || ||||| ||||| Sbjct 859957 TCCCATCTTCAATAGTGAGAATTGACACATCAAAAGTGCCTCCTCCCAAGTCAAA 859903 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| || | || ||||| || || || ||||| | || ||| || || ||||||| Sbjct 859646 ATGCCGTGGTCACAGTACCTGCATACTTCAATGACTCTCAACGTCAGGCTACCAAAGATG 859705 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| || | ||||| || ||||| |||||||| || |||||||| || | Sbjct 859706 CTGGGACTATTGCTGGTCTGAATGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCCA 859765 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| | ||||||| Sbjct 859766 TTGCTTATGGCTTGGATAAAA 859786 >seq24 Length=8999101 Score = 190 bits (210), Expect = 6e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | ||| | |||||||||||| || ||||| |||||||| || || || || Sbjct 2890499 ACCACCACGCAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGA 2890558 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || |||||||||| || || || |||||||| || ||||||||||| |||||||| Sbjct 2890559 CAGAGTATGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGG 2890618 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| |||||||||||||| || || ||||| ||||| || || | ||| || || || || Sbjct 2890619 AATGCCTTCTTTATCCTGGATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGAC 2890678 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| || || || || || || ||||||||||| Sbjct 2890679 CTCGAGCGTGATGGTCTTCCCAGTGAGGGTCTTCACGAAAATCTGCAT 2890726 >seq602 Length=1640730 Score = 158 bits (174), Expect = 4e-33 Identities = 396/593 (67%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762 ||||| || ||| | | |||||||||| |||| | |||| |||||||| | ||| Sbjct 122455 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCA 122514 Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822 ||||| || |||| || || | ||| ||||| | ||||| | ||||| || || Sbjct 122515 GGCATCAATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATT 122574 Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882 ||||| || ||||| ||||||| | | | || | | | |||||||| || ||| Sbjct 122575 CCTTCCACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATC 122634 Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942 || | || ||||||||||| || ||||| | ||||| | | || | ||| || || Sbjct 122635 CAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 122694 Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000 | | ||| |||| || || | || || || || || | |||| |||||| Sbjct 122695 AGGAATTC--CCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTT 122752 Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060 || ||||| |||||||| || || || || ||||| || || |||| || | Sbjct 122753 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCT 122812 Query 224061 GTACTTCTGTCATAAA--TCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGC 224118 | |||||| |||| ||| | | || || || ||||| |||||||| ||||| Sbjct 122813 GAACTTCTTGGCTAAACCGCTTCA--CCAAGTTTTCATTCACTATTCCATCACTGGCCGC 122870 Query 224119 AAAAAATGCCAATATCAT-AGAAATAAAATATCTTTCATCATTGGTT--AATGATAACCA 224175 ||||| | ||| ||| || ||||||||||| || ||| |||| | | ||| Sbjct 122871 GAAAAAAG-CAAGCACATGGGATATAAAATATCTCTCCTCA--GGTTTCAGGGCCTCCCA 122927 Query 224176 GTGCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTT 224235 |||| | || || || | || || || | ||| ||||||| | | || || || Sbjct 122928 GTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTT 122987 Query 224236 TTTATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288 |||||||| | ||| ||||| |||| || || ||||| || |||||||||| Sbjct 122988 CTTATACATCTGCCAGATATCATGGTATTTGATGGGAAAGATGACAAAGCGAC 123040 >seq556 Length=1594741 Score = 149 bits (164), Expect = 2e-30 Identities = 150/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||| ||| | | ||| |||||||||||| | ||||| |||||||| || || ||| | Sbjct 329476 ACCCCCATGAAGTCTCGAAACAAGATGAAGTG--GACTCCTTTTGAATTTTGTAGTCAAA 329533 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || ||||||||||| |||||||| | |||||| ||||| | ||||||||||||||| Sbjct 329534 ----GTACGCCCATCTTCTAGTTGTTTGCTAGCAAAAATTAGTCTTTGCTGATCAGGAGG 329589 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| |||||||||||||| || || ||||| || || | || | ||| |||| |||||| Sbjct 329590 AATACCTTCTTTATCCTGGATCTTGGCTTTCACGTTCTTTATGGTATCTGATGATTCAAC 329649 Query 140690 TTCAAGTGTAACTG 140703 || || | || || Sbjct 329650 CTCGAGAGAAATTG 329663 >seq418 Length=2079112 Score = 132 bits (146), Expect = 1e-25 Identities = 388/591 (66%), Gaps = 15/591 (3%) Strand=Plus/Plus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762 ||||| || ||| | | |||||||||| |||| | ||| |||||||| | ||| Sbjct 761378 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCA 761437 Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822 ||||| || |||| || || | ||| ||||| | ||||| || ||| | || || Sbjct 761438 GGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATT 761497 Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882 ||||| || ||| ||| ||| || | || | | | |||||||| || ||| Sbjct 761498 CCTTCCACTGCTCTAAAGGCTCCTACATGTTCTCCATAGGTGGCTTCTTTGTCCCCAATC 761557 Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942 || || ||||||||||| || ||||| | ||||| | | || | ||| || || Sbjct 761558 CAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 761617 Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000 | | ||| | ||| || ||| | || || || || | |||| |||||| Sbjct 761618 AGGAATTCCCTCTCT--TTGGAATC-----TTTAAGTATCGATGAGGAGACTGTACATTT 761670 Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060 || ||||| |||||||| || || || || ||||| || | || |||| || | Sbjct 761671 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCT 761730 Query 224061 GTACTTCTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAA 224120 | |||||| |||| | | || || || ||||| |||||||| ||||| | Sbjct 761731 GAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGA 761790 Query 224121 AAAATGCCAATATCATAGAA-ATAAAATATCTTTCATCATTGGTT--AATGATAACCAGT 224177 | || |||| | ||| | | ||||||||||| || ||| |||| | | ||||| Sbjct 761791 AGAAAGCCAGCA-CATGGGATATAAAATATCTCTCCTCA--GGTTTCAGGGCCTCCCAGT 761847 Query 224178 GCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTT 224237 || | || || || | || || || | ||| |||||| || | || ||||| | Sbjct 761848 GCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCT 761907 Query 224238 TATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288 ||||||| | ||| ||||| |||| || || ||||| || |||||| ||| Sbjct 761908 TATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAAGTGAC 761958 >seq802 Length=919857 Score = 131 bits (144), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 140512 CACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATA 140571 ||||| | | ||| | |||||||||||| || ||||| |||||||| || || | || | Sbjct 2898 CACCATGAAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTTTAGTGTGACA 2839 Query 140572 ATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT-AGACGTTGCTGATCAGGAGGA 140630 || ||| |||| || ||| | |||||||| | | || | |||||| | ||||||| Sbjct 2838 GAGTAGACCCGTCTTTCAGCTGTATGCCAGCAAAAAATCAGTCTTTGCTGGTTAGGAGGA 2779 Query 140631 ---ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || |||||||||||| || || ||||| ||||| || | | ||| || ||||| Sbjct 2778 GGAATGTCTTCTTTATCCTAGATCTTGGCTTTCACATTCTCTGTAGTATCTGAGGGTTCG 2719 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| | |||||| || || || || || | ||||||||||| Sbjct 2718 ACCTCTAGTGTGATTGTCTTCCCAGTGAGGGTCTTCATGAAAATCTGCAT 2669 >seq30 Length=8517879 Score = 127 bits (140), Expect = 6e-24 Identities = 387/591 (65%), Gaps = 9/591 (2%) Strand=Plus/Minus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762 ||||| || ||| | | |||||||||| |||| ||||| |||||||| | || Sbjct 2591658 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCG 2591599 Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822 ||||| | |||| || || | ||| ||||| | ||||| || ||||| || || Sbjct 2591598 GGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATT 2591539 Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882 ||||| || ||||| ||||||| | | | || | | |||||||| || ||| Sbjct 2591538 CCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATC 2591479 Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942 || || ||||||||||| || ||||| | ||||| | | || | ||| || || Sbjct 2591478 CAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 2591419 Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000 | | ||| |||| || ||| | | || || || || | |||| |||||| Sbjct 2591418 AGGAATTC--CCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTT 2591361 Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060 || ||||| |||||||| || || || || ||||| || || |||| || | Sbjct 2591360 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCT 2591301 Query 224061 GTACTTCTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAA 224120 | |||||| |||| | | || || || ||||| |||||||| || || | Sbjct 2591300 GAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGA 2591241 Query 224121 AAAATGCCAATATCAT-AGAAATAAAATATCTTTCATCATTGGTTAA--TGATAACCAGT 224177 | || |||| | ||| || ||||||||||| || ||| | || | | ||||| Sbjct 2591240 AGAAAGCCAGGA-CATGGGATATAAAATATCTCTCCTCA-GGTTTCAGGGGCCTCCCAGT 2591183 Query 224178 GCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTT 224237 || | || | || | || || || | ||| ||||||| | | || || || | Sbjct 2591182 GCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCT 2591123 Query 224238 TATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288 ||||||| | ||| ||||| |||| || || ||||| || |||||||||| Sbjct 2591122 TATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAAGCGAC 2591072 >seq501 Length=1755529 Score = 125 bits (138), Expect = 2e-23 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140522 TCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCC 140581 ||| | |||||| ||||| || ||||| |||||| | || || ||||| || || ||||| Sbjct 1647422 TCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGAGTCTTGTAGTCAGACAAAGTACGCCC 1647363 Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641 |||||| || || | |||||||| ||| | | ||||||||||||||||||||||||| Sbjct 1647362 ATCTTCTAGAGGTCTGCCAGCAAAATTTAATCTTGGCTGATCAGGAGGAATTCCTTCTTT 1647303 Query 140642 ATCCTGAATTTTAGCTTTTACATT 140665 ||| || | || ||||||| ||| Sbjct 1647302 ATCTTGGACCTTGGCTTTTATATT 1647279 >seq951 Length=571157 Score = 114 bits (126), Expect = 4e-20 Identities = 140/187 (75%), Gaps = 7/187 (4%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||| | | ||| | ||||||||||| || |||| |||||| || || ||||| Sbjct 473215 ACCACCATGAAGTCTCAAAACAAGATGAAATGTGAACTCCTTTTGACG-TTGTAGTCAGA 473273 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT-AGACGTTGCTGATCAGGAG 140628 ||| || ||||||||| ||| |||||||| | | || | |||||| ||||||| Sbjct 473274 GTATGCTC----ATCTTCAAGCAATTTGCCAGCAAAAAATCAGTC-TTGCTGGTCAGGAG 473328 Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688 ||| |||||||||||||| || || ||||| ||||| | || | ||| || ||||||| Sbjct 473329 AAATCCCTTCTTTATCCTGTATCTTGGCTTTCACATTCTATATAGGATCTGAGGGTTCAA 473388 Query 140689 CTTCAAG 140695 | || || Sbjct 473389 CCTCGAG 473395 >seq42 Length=7019203 Score = 111 bits (122), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| || ||||| |||||||| || ||||||||||||||||| || |||||| | Sbjct 5605637 CAGCCTGGACAGCAGCACCATAAGCCACAGCTTCATCTGGGTTTATGCCTCGAGATGGCT 5605696 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| || || ||| || || ||| ||||| ||||| |||| ||| || |||| Sbjct 5605697 CCTTGCCATTGAAGAACTCTTTAACCAGTTGCTGAATCTTTGGGATTCGAGTAGAGCCAC 5605756 Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427 | || | || | |||||| |||| |||||| | || | || |||| | ||||| Sbjct 5605757 CAACAAGAACAATTTCATCAATATCAGACTTTTTCAAA--TCAGAGTCTTCCAGCACTTT 5605814 Query 183428 TTCAACAGGGTCCATAGTT 183446 | ||||| | ||| ||| Sbjct 5605815 CTGGACAGGCTTCATGGTT 5605833 Score = 104 bits (114), Expect = 7e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 ||||||||| | ||| | |||||||| ||||| || || ||||| |||| || | | Sbjct 5605778 ATTGATGAAATTGTTCTTGTTGGTGGCTCTACTCGAATCCCAAAGATTCAGCAACTGGTT 5605719 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || |||||||| || || ||| || || || |||||||||||||| || Sbjct 5605718 AAAGAGTTCTTCAATGGCAAGGAGCCATCTCGAGGCATAAACCCAGATGAAGCTGTGGCT 5605659 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||||||||| ||||| Sbjct 5605658 TATGGTGCTGCTGTCCAGGC 5605639 Score = 96.9 bits (106), Expect = 1e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660 || ||| |||| || ||||||||||||||||||| |||||||| ||||| ||||| Sbjct 5606539 GTTACTCATGCAGTAGTTACTGTACCAGCCTATTTCAATGATGCTCAGCGCCAGGCAACC 5606480 Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 ||||||||||| | ||||| || || || ||| | || || || |||||||| Sbjct 5606479 AAAGATGCTGGAACTATTGCTGGATTGAACGTTATGAGGATCATCAATGAACC 5606427 Score = 89.7 bits (98), Expect = 2e-12 Identities = 130/183 (71%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || || || || ||||| ||||| |||||||| ||| || || ||||| || || Sbjct 5606328 ACAGCAGCTGCTATTGCTTATGGCCTTGATAA---GAGGGAAGGGGAGAAAAACATCCTG 5606272 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| | |||||||| || || ||||| || || || || |||| | || | Sbjct 5606271 GTATTTGACCTTGGTGGTGGAACCTTCGATGTGTCTCTTCTCACCATTGATAATGGTGTC 5606212 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 |||||||| || ||| ||| ||||| || || ||||||||||| |||||| | ||| Sbjct 5606211 TTTGAAGTGGTGGCCACTAATGGAGATACTCACCTGGGTGGAGAAGACTTTGATCAGCGT 5606152 Query 349895 CTC 349897 || Sbjct 5606151 GTC 5606149 >seq608 Length=1396534 Score = 100 bits (110), Expect = 9e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 || || || || || ||| ||| || || || || ||||| | || || |||||||| Sbjct 1124034 ACCAGGTGCAGGGTCAACTTTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 1123975 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 | || |||||||||||||| || | |||||||||| |||| ||||| |||||||| Sbjct 1123974 AACTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCAGAGAGAATGCCTTCCTTATCCTGG 1123915 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 || || || || ||||| || || |||||| |||| | ||| || || | || || Sbjct 1123914 ATCTTGGCCTTCACATTCTCTATGGAATCACTGAGTTCCATTTCCAGGGTGATGGTTTTG 1123855 Query 140709 CCGGTTAGTGTTTTTACAAAAAT 140731 | || || | || ||||| || Sbjct 1123854 TCAGTCAGGATCTTCACAAAGAT 1123832 >seq21 Length=9016915 Score = 98.7 bits (108), Expect = 3e-15 Identities = 119/161 (74%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 140578 GCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT 140637 |||||||||| |||||||| || ||| || || ||||| |||||||||||| || Sbjct 5151931 GCCCATCTTCTAGTTGTTTGCCCATAAAAATCAGTTTTTGCTCTTCAGGAGGAATTATTT 5151990 Query 140638 CTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGT 140696 |||||||||| || || | |||| | ||| || | | ||| || |||||||| ||||| Sbjct 5151991 CTTTATCCTGGATCTTGGTTTTTCAAATTCTCTACAGTATCTGAGGGTTCAACCTCAAGC 5152050 Query 140697 GTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | | ||| || | || ||||| | ||||||||||| Sbjct 5152051 ATGATAGCCTTCCCTGGGAGGGTTTTCCCGAAAATCTGCAT 5152091 >seq703 Length=1180621 Score = 84.2 bits (92), Expect = 7e-11 Identities = 167/240 (70%), Gaps = 12/240 (5%) Strand=Plus/Minus Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251 || || ||||||||||| ||||| | || |||| ||| |||| || || || ||| Sbjct 58836 TTGGTGGGTGGTTCTACTTGTATTGCCAAGATTCAGAAGTCTCTATAAGACTTCTTCAAT 58777 Query 350252 GGCAAAGAACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309 | |||||| || | | || || || || |||| |||||| | |||||||| |||| Sbjct 58776 GTAAAAGAA--TTAAACAACAGCATCAACCCTGATGCAGCTGTAGTTTATGGTGCAGCTG 58719 Query 350310 TTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAG 350369 | |||||| ||| |||||||| | ||| | || ||| | ||| | | || | | Sbjct 58718 TCCAGGCAGTCATTCTATCTGGAGACAAGTCTGAAAATATTCAGGAT-TGCTGCTGTTGG 58660 Query 350370 ATGTAACTCCACTTT-CGCTTGGATTAGAAACT-TCTGGTGAAGTAATGACTGTTCTTAT 350427 |||| |||| |||| | || | ||| ||||| | |||| ||||||||||| || || Sbjct 58659 ATGTCACTCATCTTTCCACTGGCATT--AAACTATTTGGT---GTAATGACTGTCCTCAT 58605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515141739414809