Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq409 212 2e-49
seq24 190 6e-43
seq602 158 4e-33
seq556 149 2e-30
seq418 132 1e-25
seq802 131 5e-25
seq30 127 6e-24
seq501 125 2e-23
seq951 114 4e-20
seq42 111 5e-19
seq608 100 9e-16
seq21 98.7 3e-15
seq703 84.2 7e-11
>seq409
Length=2050159
Score = 212 bits (234), Expect = 2e-49
Identities = 379/546 (69%), Gaps = 12/546 (2%)
Strand=Plus/Plus
Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824
|||| | || || ||||| || || || || ||||||||||| ||| | || || ||||
Sbjct 859890 AAATGTGCTGATCTTTGACTTGGGAGGAGGCACTTTTGATGTGTCAATTCTCACTATTGA 859949
Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884
||| || || |||||||| ||| | || || || || || || | ||||||||||| ||
Sbjct 859950 AGATGGGATCTTTGAAGTCAAATCTACAGCAGGAGACACCCACTTGGGTGGAGAAGACTT 860009
Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATA 349943
||| ||||| | || |||||| || |||||| || || ||||| || | || |
Sbjct 860010 TGACAATCGAATGGTCAACCATTTTATTGCAGAATTCAAACG-CAAGCACAAGAAGGACA 860068
Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003
| | || || || || | || |||||| | ||||| ||||||||||| ||||||
Sbjct 860069 TAAGTGAGAACAAGAGGGCTGTCCGCCGCCTACGTACTGCTTGTGAACGTGCAAAGCGTA 860128
Query 350004 CCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT 350063
| | || || | ||||| || ||||||||||||||| || ||| || | ||||
Sbjct 860129 CACTCTCTTCCAGCACCCAGGCCAGTATTGAAATTGATTCCCTGTATGAAGGAATTGATT 860188
Query 350064 TCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGC 350121
||| | || ||||| || || || |||||||||| || ||| || | || | |
Sbjct 860189 TCTACACCTCCATTACCCGGGCCCGATTTGAAGAAT--TGAATGCTGACTTGTTCCGTGG 860246
Query 350122 AACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGA 350181
|| ||||||| || ||||||| | ||||| || | |||| |||||| |
Sbjct 860247 CACCCTGGATCCAGTAGAAAAAGCCCTTCGGGATGCCAAGCTTGACAAATCCCAGATTCA 860306
Query 350182 TGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGA 350241
||| | || || || ||||||||||| ||||| || || |||| || | || ||
Sbjct 860307 TGACATTGTCTTGGTGGGTGGTTCTACTCGTATCCCCAAGATTCAGAAGCTTTTACAGGA 860366
Query 350242 GTTTTTTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATA 350298
|| || ||||| |||||| || | ||| | || || || ||||| ||||| || ||
Sbjct 860367 CTTCTTCAATGGGAAAGAA--TTGAACAAGAGC-ATCAACCCTGATGAGGCTGTGGCTTA 860423
Query 350299 TGGTGC 350304
||||||
Sbjct 860424 TGGTGC 860429
Score = 138 bits (152), Expect = 3e-27
Identities = 355/535 (66%), Gaps = 12/535 (2%)
Strand=Plus/Minus
Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320
|||||||||| || ||||| ||||| ||||| || | | | | |||||||| |||||
Sbjct 860431 CTGCACCATAAGCCACAGCCTCATCAGGGTTGAT-GCTCTTGTTCAATTCTTTCCCATTG 860373
Query 183321 AAAAATTC---TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAAT 183377
|| || || | ||||| | || ||| || || || | ||| |||||||| || ||
Sbjct 860372 AAGAAGTCCTGTAAAAGCTTCTG---AATCTTGGGGATACGAGTAGAACCACCCACCAAG 860316
Query 183378 ACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGG 183437
|| | |||| || | ||| || | | ||| | ||||||| || ||
Sbjct 860315 ACAATGTCATGAATCTGGGATTTGTCAAGCTTGGCATCCCGAAGGGCTTTTTCTACTGGA 860256
Query 183438 TCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGAT 183497
|||| || | || || || | || ||||| |||| || | || | ||
Sbjct 860255 TCCAGGGTGCCACGGAACAAGTCAGCATTCAATTCTTCAAATCGGGCCCGGGTAATGGAG 860196
Query 183498 GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGAT 183557
| | || ||||| || | ||| | ||||||||||||||| | || || ||
Sbjct 860195 GTGTAGAAATCAATTCCTTCATACAGGGAATCAATTTCAATACTGGCCTGGGTGCTGGAA 860136
Query 183558 GATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATG--ATCTTGGAT 183615
|| | ||| | || || |||||||| || || | ||| || || | | ||||| |
Sbjct 860135 GAGAGTGTACGCTTTGCACGTTCACAAGCAGTACGTAGGCGGCGGACAGCCCTCTTG--T 860078
Query 183616 TATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATC 183675
| || | || || | || || || | ||| ||||| | ||||||||| | | | ||
Sbjct 860077 TCTCACTTATGTCCTTCTTGTGCTTGCGTTTGAATTCTGCAATAAAATGGTTGACCATTC 860018
Query 183676 TTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATA 183735
| ||||| ||||| ||||| || || || || || || |||| ||| |||||||| |
Sbjct 860017 GATTGTCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCTGCTGTAGATTTGACTTCAAAGA 859958
Query 183736 TTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
| || ||||||||| | | |||||| |||||||| || || || ||||| |||||
Sbjct 859957 TCCCATCTTCAATAGTGAGAATTGACACATCAAAAGTGCCTCCTCCCAAGTCAAA 859903
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
|||| || | || ||||| || || || ||||| | || ||| || || |||||||
Sbjct 859646 ATGCCGTGGTCACAGTACCTGCATACTTCAATGACTCTCAACGTCAGGCTACCAAAGATG 859705
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727
|||| | ||||| || | ||||| || ||||| |||||||| || |||||||| || |
Sbjct 859706 CTGGGACTATTGCTGGTCTGAATGTACTTAGAATCATTAATGAGCCAACTGCTGCTGCCA 859765
Query 349728 TTGCATATGGGCTTGATAAAA 349748
|||| ||||| | |||||||
Sbjct 859766 TTGCTTATGGCTTGGATAAAA 859786
>seq24
Length=8999101
Score = 190 bits (210), Expect = 6e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | ||| | |||||||||||| || ||||| |||||||| || || || ||
Sbjct 2890499 ACCACCACGCAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCCGA 2890558
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || |||||||||| || || || |||||||| || ||||||||||| ||||||||
Sbjct 2890559 CAGAGTATGCCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCAGGAGG 2890618
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||| |||||||||||||| || || ||||| ||||| || || | ||| || || || ||
Sbjct 2890619 AATGCCTTCTTTATCCTGGATCTTGGCTTTCACATTCTCTATAGTATCTGAGGGCTCGAC 2890678
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | ||||| || || || || || || |||||||||||
Sbjct 2890679 CTCGAGCGTGATGGTCTTCCCAGTGAGGGTCTTCACGAAAATCTGCAT 2890726
>seq602
Length=1640730
Score = 158 bits (174), Expect = 4e-33
Identities = 396/593 (67%), Gaps = 14/593 (2%)
Strand=Plus/Plus
Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762
||||| || ||| | | |||||||||| |||| | |||| |||||||| | |||
Sbjct 122455 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCA 122514
Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822
||||| || |||| || || | ||| ||||| | ||||| | ||||| || ||
Sbjct 122515 GGCATCAATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATT 122574
Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882
||||| || ||||| ||||||| | | | || | | | |||||||| || |||
Sbjct 122575 CCTTCCACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATC 122634
Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942
|| | || ||||||||||| || ||||| | ||||| | | || | ||| || ||
Sbjct 122635 CAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 122694
Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000
| | ||| |||| || || | || || || || || | |||| ||||||
Sbjct 122695 AGGAATTC--CCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTT 122752
Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060
|| ||||| |||||||| || || || || ||||| || || |||| || |
Sbjct 122753 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCT 122812
Query 224061 GTACTTCTGTCATAAA--TCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGC 224118
| |||||| |||| ||| | | || || || ||||| |||||||| |||||
Sbjct 122813 GAACTTCTTGGCTAAACCGCTTCA--CCAAGTTTTCATTCACTATTCCATCACTGGCCGC 122870
Query 224119 AAAAAATGCCAATATCAT-AGAAATAAAATATCTTTCATCATTGGTT--AATGATAACCA 224175
||||| | ||| ||| || ||||||||||| || ||| |||| | | |||
Sbjct 122871 GAAAAAAG-CAAGCACATGGGATATAAAATATCTCTCCTCA--GGTTTCAGGGCCTCCCA 122927
Query 224176 GTGCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTT 224235
|||| | || || || | || || || | ||| ||||||| | | || || ||
Sbjct 122928 GTGCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTT 122987
Query 224236 TTTATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288
|||||||| | ||| ||||| |||| || || ||||| || ||||||||||
Sbjct 122988 CTTATACATCTGCCAGATATCATGGTATTTGATGGGAAAGATGACAAAGCGAC 123040
>seq556
Length=1594741
Score = 149 bits (164), Expect = 2e-30
Identities = 150/194 (77%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||| ||| | | ||| |||||||||||| | ||||| |||||||| || || ||| |
Sbjct 329476 ACCCCCATGAAGTCTCGAAACAAGATGAAGTG--GACTCCTTTTGAATTTTGTAGTCAAA 329533
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
|| ||||||||||| |||||||| | |||||| ||||| | |||||||||||||||
Sbjct 329534 ----GTACGCCCATCTTCTAGTTGTTTGCTAGCAAAAATTAGTCTTTGCTGATCAGGAGG 329589
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||| |||||||||||||| || || ||||| || || | || | ||| |||| ||||||
Sbjct 329590 AATACCTTCTTTATCCTGGATCTTGGCTTTCACGTTCTTTATGGTATCTGATGATTCAAC 329649
Query 140690 TTCAAGTGTAACTG 140703
|| || | || ||
Sbjct 329650 CTCGAGAGAAATTG 329663
>seq418
Length=2079112
Score = 132 bits (146), Expect = 1e-25
Identities = 388/591 (66%), Gaps = 15/591 (3%)
Strand=Plus/Plus
Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762
||||| || ||| | | |||||||||| |||| | ||| |||||||| | |||
Sbjct 761378 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCA 761437
Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822
||||| || |||| || || | ||| ||||| | ||||| || ||| | || ||
Sbjct 761438 GGCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATT 761497
Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882
||||| || ||| ||| ||| || | || | | | |||||||| || |||
Sbjct 761498 CCTTCCACTGCTCTAAAGGCTCCTACATGTTCTCCATAGGTGGCTTCTTTGTCCCCAATC 761557
Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942
|| || ||||||||||| || ||||| | ||||| | | || | ||| || ||
Sbjct 761558 CAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 761617
Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000
| | ||| | ||| || ||| | || || || || | |||| ||||||
Sbjct 761618 AGGAATTCCCTCTCT--TTGGAATC-----TTTAAGTATCGATGAGGAGACTGTACATTT 761670
Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060
|| ||||| |||||||| || || || || ||||| || | || |||| || |
Sbjct 761671 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCT 761730
Query 224061 GTACTTCTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAA 224120
| |||||| |||| | | || || || ||||| |||||||| ||||| |
Sbjct 761731 GAACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGA 761790
Query 224121 AAAATGCCAATATCATAGAA-ATAAAATATCTTTCATCATTGGTT--AATGATAACCAGT 224177
| || |||| | ||| | | ||||||||||| || ||| |||| | | |||||
Sbjct 761791 AGAAAGCCAGCA-CATGGGATATAAAATATCTCTCCTCA--GGTTTCAGGGCCTCCCAGT 761847
Query 224178 GCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTT 224237
|| | || || || | || || || | ||| |||||| || | || ||||| |
Sbjct 761848 GCTGGATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCT 761907
Query 224238 TATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288
||||||| | ||| ||||| |||| || || ||||| || |||||| |||
Sbjct 761908 TATACATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAAGTGAC 761958
>seq802
Length=919857
Score = 131 bits (144), Expect = 5e-25
Identities = 168/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 140512 CACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATA 140571
||||| | | ||| | |||||||||||| || ||||| |||||||| || || | || |
Sbjct 2898 CACCATGAAGTCTCAAAACAAGATGAAGTGTGGACTCCTTTTGAATGTTTTAGTGTGACA 2839
Query 140572 ATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT-AGACGTTGCTGATCAGGAGGA 140630
|| ||| |||| || ||| | |||||||| | | || | |||||| | |||||||
Sbjct 2838 GAGTAGACCCGTCTTTCAGCTGTATGCCAGCAAAAAATCAGTCTTTGCTGGTTAGGAGGA 2779
Query 140631 ---ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|| |||||||||||| || || ||||| ||||| || | | ||| || |||||
Sbjct 2778 GGAATGTCTTCTTTATCCTAGATCTTGGCTTTCACATTCTCTGTAGTATCTGAGGGTTCG 2719
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || ||||| | |||||| || || || || || | |||||||||||
Sbjct 2718 ACCTCTAGTGTGATTGTCTTCCCAGTGAGGGTCTTCATGAAAATCTGCAT 2669
>seq30
Length=8517879
Score = 127 bits (140), Expect = 6e-24
Identities = 387/591 (65%), Gaps = 9/591 (2%)
Strand=Plus/Minus
Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762
||||| || ||| | | |||||||||| |||| ||||| |||||||| | ||
Sbjct 2591658 GCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACCG 2591599
Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822
||||| | |||| || || | ||| ||||| | ||||| || ||||| || ||
Sbjct 2591598 GGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATT 2591539
Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882
||||| || ||||| ||||||| | | | || | | |||||||| || |||
Sbjct 2591538 CCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAATC 2591479
Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAAC 223942
|| || ||||||||||| || ||||| | ||||| | | || | ||| || ||
Sbjct 2591478 CAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 2591419
Query 223943 A--ACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTA 224000
| | ||| |||| || ||| | | || || || || | |||| ||||||
Sbjct 2591418 AGGAATTC--CCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTT 2591361
Query 224001 TTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTT 224060
|| ||||| |||||||| || || || || ||||| || || |||| || |
Sbjct 2591360 CAGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCT 2591301
Query 224061 GTACTTCTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAA 224120
| |||||| |||| | | || || || ||||| |||||||| || || |
Sbjct 2591300 GAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGA 2591241
Query 224121 AAAATGCCAATATCAT-AGAAATAAAATATCTTTCATCATTGGTTAA--TGATAACCAGT 224177
| || |||| | ||| || ||||||||||| || ||| | || | | |||||
Sbjct 2591240 AGAAAGCCAGGA-CATGGGATATAAAATATCTCTCCTCA-GGTTTCAGGGGCCTCCCAGT 2591183
Query 224178 GCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTT 224237
|| | || | || | || || || | ||| ||||||| | | || || || |
Sbjct 2591182 GCTGGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCT 2591123
Query 224238 TATACATTTCCCATATATCTTGGTCTTGTATCGGAAACATTACAAAGCGAC 224288
||||||| | ||| ||||| |||| || || ||||| || ||||||||||
Sbjct 2591122 TATACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAAGCGAC 2591072
>seq501
Length=1755529
Score = 125 bits (138), Expect = 2e-23
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 140522 TCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCC 140581
||| | |||||| ||||| || ||||| |||||| | || || ||||| || || |||||
Sbjct 1647422 TCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGAGTCTTGTAGTCAGACAAAGTACGCCC 1647363
Query 140582 ATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 140641
|||||| || || | |||||||| ||| | | |||||||||||||||||||||||||
Sbjct 1647362 ATCTTCTAGAGGTCTGCCAGCAAAATTTAATCTTGGCTGATCAGGAGGAATTCCTTCTTT 1647303
Query 140642 ATCCTGAATTTTAGCTTTTACATT 140665
||| || | || ||||||| |||
Sbjct 1647302 ATCTTGGACCTTGGCTTTTATATT 1647279
>seq951
Length=571157
Score = 114 bits (126), Expect = 4e-20
Identities = 140/187 (75%), Gaps = 7/187 (4%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||| | | ||| | ||||||||||| || |||| |||||| || || |||||
Sbjct 473215 ACCACCATGAAGTCTCAAAACAAGATGAAATGTGAACTCCTTTTGACG-TTGTAGTCAGA 473273
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT-AGACGTTGCTGATCAGGAG 140628
||| || ||||||||| ||| |||||||| | | || | |||||| |||||||
Sbjct 473274 GTATGCTC----ATCTTCAAGCAATTTGCCAGCAAAAAATCAGTC-TTGCTGGTCAGGAG 473328
Query 140629 GAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAA 140688
||| |||||||||||||| || || ||||| ||||| | || | ||| || |||||||
Sbjct 473329 AAATCCCTTCTTTATCCTGTATCTTGGCTTTCACATTCTATATAGGATCTGAGGGTTCAA 473388
Query 140689 CTTCAAG 140695
| || ||
Sbjct 473389 CCTCGAG 473395
>seq42
Length=7019203
Score = 111 bits (122), Expect = 5e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| || ||||| |||||||| || ||||||||||||||||| || |||||| |
Sbjct 5605637 CAGCCTGGACAGCAGCACCATAAGCCACAGCTTCATCTGGGTTTATGCCTCGAGATGGCT 5605696
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
| |||||||| || || ||| || || ||| ||||| ||||| |||| ||| || ||||
Sbjct 5605697 CCTTGCCATTGAAGAACTCTTTAACCAGTTGCTGAATCTTTGGGATTCGAGTAGAGCCAC 5605756
Query 183370 CGACTAATACTACTTCATCGATAT--TACTTTTACTAATTTGTGAATCTTTTAAAACTTT 183427
| || | || | |||||| |||| |||||| | || | || |||| | |||||
Sbjct 5605757 CAACAAGAACAATTTCATCAATATCAGACTTTTTCAAA--TCAGAGTCTTCCAGCACTTT 5605814
Query 183428 TTCAACAGGGTCCATAGTT 183446
| ||||| | ||| |||
Sbjct 5605815 CTGGACAGGCTTCATGGTT 5605833
Score = 104 bits (114), Expect = 7e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
||||||||| | ||| | |||||||| ||||| || || ||||| |||| || | |
Sbjct 5605778 ATTGATGAAATTGTTCTTGTTGGTGGCTCTACTCGAATCCCAAAGATTCAGCAACTGGTT 5605719
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296
||||| || |||||||| || || ||| || || || |||||||||||||| ||
Sbjct 5605718 AAAGAGTTCTTCAATGGCAAGGAGCCATCTCGAGGCATAAACCCAGATGAAGCTGTGGCT 5605659
Query 350297 TATGGTGCTGCTGTTCAGGC 350316
|||||||||||||| |||||
Sbjct 5605658 TATGGTGCTGCTGTCCAGGC 5605639
Score = 96.9 bits (106), Expect = 1e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660
|| ||| |||| || ||||||||||||||||||| |||||||| ||||| |||||
Sbjct 5606539 GTTACTCATGCAGTAGTTACTGTACCAGCCTATTTCAATGATGCTCAGCGCCAGGCAACC 5606480
Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713
||||||||||| | ||||| || || || ||| | || || || ||||||||
Sbjct 5606479 AAAGATGCTGGAACTATTGCTGGATTGAACGTTATGAGGATCATCAATGAACC 5606427
Score = 89.7 bits (98), Expect = 2e-12
Identities = 130/183 (71%), Gaps = 3/183 (2%)
Strand=Plus/Minus
Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774
|| || || || ||||| ||||| |||||||| ||| || || ||||| || ||
Sbjct 5606328 ACAGCAGCTGCTATTGCTTATGGCCTTGATAA---GAGGGAAGGGGAGAAAAACATCCTG 5606272
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
| ||||| | |||||||| || || ||||| || || || || |||| | || |
Sbjct 5606271 GTATTTGACCTTGGTGGTGGAACCTTCGATGTGTCTCTTCTCACCATTGATAATGGTGTC 5606212
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894
|||||||| || ||| ||| ||||| || || ||||||||||| |||||| | |||
Sbjct 5606211 TTTGAAGTGGTGGCCACTAATGGAGATACTCACCTGGGTGGAGAAGACTTTGATCAGCGT 5606152
Query 349895 CTC 349897
||
Sbjct 5606151 GTC 5606149
>seq608
Length=1396534
Score = 100 bits (110), Expect = 9e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588
|| || || || || ||| ||| || || || || ||||| | || || ||||||||
Sbjct 1124034 ACCAGGTGCAGGGTCAACTTTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 1123975
Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648
| || |||||||||||||| || | |||||||||| |||| ||||| ||||||||
Sbjct 1123974 AACTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCAGAGAGAATGCCTTCCTTATCCTGG 1123915
Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708
|| || || || ||||| || || |||||| |||| | ||| || || | || ||
Sbjct 1123914 ATCTTGGCCTTCACATTCTCTATGGAATCACTGAGTTCCATTTCCAGGGTGATGGTTTTG 1123855
Query 140709 CCGGTTAGTGTTTTTACAAAAAT 140731
| || || | || ||||| ||
Sbjct 1123854 TCAGTCAGGATCTTCACAAAGAT 1123832
>seq21
Length=9016915
Score = 98.7 bits (108), Expect = 3e-15
Identities = 119/161 (74%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 140578 GCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT 140637
|||||||||| |||||||| || ||| || || ||||| |||||||||||| ||
Sbjct 5151931 GCCCATCTTCTAGTTGTTTGCCCATAAAAATCAGTTTTTGCTCTTCAGGAGGAATTATTT 5151990
Query 140638 CTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTTCAACTTCAAGT 140696
|||||||||| || || | |||| | ||| || | | ||| || |||||||| |||||
Sbjct 5151991 CTTTATCCTGGATCTTGGTTTTTCAAATTCTCTACAGTATCTGAGGGTTCAACCTCAAGC 5152050
Query 140697 GTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| | | ||| || | || ||||| | |||||||||||
Sbjct 5152051 ATGATAGCCTTCCCTGGGAGGGTTTTCCCGAAAATCTGCAT 5152091
>seq703
Length=1180621
Score = 84.2 bits (92), Expect = 7e-11
Identities = 167/240 (70%), Gaps = 12/240 (5%)
Strand=Plus/Minus
Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251
|| || ||||||||||| ||||| | || |||| ||| |||| || || || |||
Sbjct 58836 TTGGTGGGTGGTTCTACTTGTATTGCCAAGATTCAGAAGTCTCTATAAGACTTCTTCAAT 58777
Query 350252 GGCAAAGAACCTTCTAGATCA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTG 350309
| |||||| || | | || || || || |||| |||||| | |||||||| ||||
Sbjct 58776 GTAAAAGAA--TTAAACAACAGCATCAACCCTGATGCAGCTGTAGTTTATGGTGCAGCTG 58719
Query 350310 TTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAG 350369
| |||||| ||| |||||||| | ||| | || ||| | ||| | | || | |
Sbjct 58718 TCCAGGCAGTCATTCTATCTGGAGACAAGTCTGAAAATATTCAGGAT-TGCTGCTGTTGG 58660
Query 350370 ATGTAACTCCACTTT-CGCTTGGATTAGAAACT-TCTGGTGAAGTAATGACTGTTCTTAT 350427
|||| |||| |||| | || | ||| ||||| | |||| ||||||||||| || ||
Sbjct 58659 ATGTCACTCATCTTTCCACTGGCATT--AAACTATTTGGT---GTAATGACTGTCCTCAT 58605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515141739414809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |