Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq110 154 1e-32
>seq110
Length=4795302
Score = 154 bits (170), Expect = 1e-32
Identities = 133/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| || |||
Sbjct 96657 AGGCCTGTGATGTGGGCGATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAAAGGC 96598
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| || ||||||||||| | |||||| || ||||| |||| |
Sbjct 96597 ACACCCAGGCCCATGTCTCCAGACCTCTGGTACAACTGGCAGGACAGCTCACCGTTCACC 96538
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|| || ||||| || | ||| ||||||||||| ||||||||||||
Sbjct 96537 ACATAGAACTGGCAGAGGGCGTGGCACGGAGGCAGGGCCATGAGA 96493
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| ||||||||||| || ||||| ||||| |||| ||| || || || ||| |||
Sbjct 92538 AAGTGCCTCCACTGAAAGCCGTAAACCGGGCCCAAGTCCCCTTCCTCTCTGGCGGAGAAT 92479
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| ||||||| ||||||| || |||||||| |||||||| | || |||||
Sbjct 92478 CCTAGGCTGTCCAAGAAGTCTCGAGACCCGTTGGCATCCCAGATTCTCACGCCCTTGGAA 92419
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| ||||| || | ||| ||||| ||
Sbjct 92418 GACAGCTCCTTAGCGTTGGTGGATCC 92393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406134474488458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |