Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq602 493 2e-134 seq30 486 3e-132 seq418 462 3e-125 seq635 273 3e-68 seq339 127 3e-24 seq446 116 5e-21 seq92 111 2e-19 seq956 89.7 7e-13 >seq602 Length=1640730 Score = 493 bits (546), Expect = 2e-134 Identities = 679/941 (72%), Gaps = 15/941 (2%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTC 47844 |||| |||| |||||| |||| || | |||| || | | |||| ||||| || | Sbjct 122101 GTTCGTTTAGAAGTCAGCATCCAAGGTAAAA-GAGTTGCCCGTTGAACTTGACATCACGC 122159 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| | | ||| || || || | ||| || || |||||||||||||||||||| | Sbjct 122160 CCATCCTCTAATACTCGCCTACTC---TCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAA 122216 Query 47905 TATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964 | || |||||||| ||||||||||| || | | ||| ||| | || || | || Sbjct 122217 TGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACTTTGCTGAAGCCCAGCTCCA 122276 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024 || ||||| || || |||||||| | || ||||| | |||||||| || | Sbjct 122277 GTATAAGTCTGTCCGCCACGAATTCAGTGTACTGCTTCATTAAAGTGCAATTCATCCCGA 122336 Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084 | || || | ||| | ||||| ||||| ||||| ||||| || ||||||||| || | Sbjct 122337 TGAGATTTATTGGCAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTGACAGCATTGACGA 122396 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATG 48144 |||| | | || | | ||| ||| || | || |||||| |||||||| || | Sbjct 122397 TTATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAA-CACG 122455 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 ||||||||||||| || || |||||||| ||||||| | | || |||||||| ||||| | Sbjct 122456 CAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGTGCATTCGAAAATGTAAGACCAG 122515 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| | ||| ||||| |||||||| ||||| | || ||||| | ||||||||| || | Sbjct 122516 GCATCAATCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACTAGAAAAGAAGATTC 122575 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCC 48321 |||| || || ||||| || | | ||||| || ||||||| |||| |||| Sbjct 122576 CTTCCACTGCTGCAAAGGCTACTACACATTCTCCATAGGTGGCTTCTTTGTCCCCAATCC 122635 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381 | | |||||||| |||||||||||||||||||||||||| || ||||| || |||| Sbjct 122636 AATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGA 122695 Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 | || | | || ||| || ||||| ||||||||| || | ||||| |||||||| | Sbjct 122696 GGAATTCCCTCTCTTTGGAATGTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAG 122755 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| || ||||| || || ||||| || || || ||||| | |||||||| ||||| | Sbjct 122756 AGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAA 122815 Query 48502 CCTCCGTACAAAATCG-TTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 | || | ||| || |||| |||| || ||||| |||||||||||||| || || ||| Sbjct 122816 CTTCTTGGCTAAACCGCTTCA-CCAAGTTTTCATTCACTATTCCATCACTGGCCGCGAAA 122874 Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620 || || | ||||| ||||||||| | || | | |||| | ||||| | | Sbjct 122875 AAAGCAAGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGG 122934 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 || || || || | || || || ||||||||||||||||| ||||| || || |||||| Sbjct 122935 ATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTATAC 122994 Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || | ||| |||||| ||||| ||| || || || ||||| Sbjct 122995 ATCTGCCAGATATCATGGTATTTGATGGGAAAGATGACAAA 123035 >seq30 Length=8517879 Score = 486 bits (538), Expect = 3e-132 Identities = 677/943 (72%), Gaps = 12/943 (1%) Strand=Plus/Minus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTC 47844 |||| |||| |||||| |||| || | |||| || || |||| ||||| || | Sbjct 2592018 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCACAC 2591960 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| | ||||| || || | | |||| || || |||||||||||||||||||| | Sbjct 2591959 CCATCCTCTGATACTCGCCTAGTCTCTTCTTAAAGAAGTTAGTTTTGCCTTCCAATGAAA 2591900 Query 47905 TATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964 | || |||||||| ||||||||||| || | | ||| || | || || | || Sbjct 2591899 TGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCA 2591840 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024 || ||||| || || |||||||| || || ||||| | || ||||| || | Sbjct 2591839 GTATGAGTCTGTCGGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGA 2591780 Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084 | || || ||||| | |||| || || ||||| ||||| || ||||||||| || | Sbjct 2591779 TGAGATTCACTGGCAAGGCCTTTGTGAGGAACTCCTGTTCTATCCTGACAGCATTGACAA 2591720 Query 48085 TTATCGATGTT--ACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACA 48142 |||| | | || | | ||| ||| || | || |||||| ||||||||||| Sbjct 2591719 TTATATTTCTCTGACTCTCTGCTCCGAAGGTTTATGTAGCAGATGTTTGAACATTAAACA 2591660 Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202 |||||||||||||| || || |||||||| ||||||| || || |||||||| ||||| Sbjct 2591659 CGCAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTCATTCGAAAATGTAAGACC 2591600 Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262 |||||| ||||| ||||| |||||||| ||||| | || ||||| ||||||||||| || Sbjct 2591599 GGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGAT 2591540 Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---AT 48319 ||||| || || ||||| || | | ||||| | ||||||| |||| || Sbjct 2591539 TCCTTCAACTGCTGCAAAGGCTACTACACATTCTCCATGGGTGGCTTCTTTGTCCCCAAT 2591480 Query 48320 CCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 ||| | |||||||| |||||||||||||||||||||||||| || ||||| || || Sbjct 2591479 CCAACACAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAA 2591420 Query 48380 GAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439 ||| || | | || ||| |||||||||||||||||| || | ||||| |||||||| Sbjct 2591419 GAGGAATTCCCTCTCTTTGGAATCTTTAACGTAAGTATCGATGAGGAGACTGTACATTTC 2591360 Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499 ||||| || ||||| || || ||||| || || || ||||| | |||||||| ||||| Sbjct 2591359 AGAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTG 2591300 Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559 || || | ||| || || |||| || ||| | ||||| |||||||| || || || Sbjct 2591299 AACTTCTTGGCTAAACCGCTCCACCAAGTTTTCACTCACTATGCCATCACTGGCTGCGAA 2591240 Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA-GTTTATTCCAGTCAT 48618 || || | ||||| ||||||||| | || | | ||| | | ||||| | Sbjct 2591239 GAAAGCCAGGACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGGCCTCCCAGTGCT 2591180 Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678 ||| || | || | || || || ||||||||||||||||| ||||| || || |||| Sbjct 2591179 GGATGTCCCTGGAAAGGTCCACCTCCTCAGCTGTCCAAAATGAGGCCTCGGCCTTCTTAT 2591120 Query 48679 ACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||| | ||| |||||| ||||| ||| || || || ||||| Sbjct 2591119 ACATCTGCCAGATATCATGGTATTCGATGGGAAAGATGACAAA 2591077 >seq418 Length=2079112 Score = 462 bits (512), Expect = 3e-125 Identities = 671/941 (71%), Gaps = 16/941 (2%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTC 47844 |||| |||| |||||| |||| || | |||| || || |||| ||||| | | Sbjct 761020 GTTCGTTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCATGC 761078 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| | ||||| || || || | ||||| || || |||||||||||||||||||| | Sbjct 761079 CCATCCTCTGATACTCCCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAA 761138 Query 47905 TATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964 | || |||||||| ||||||||||| || | | ||| || | || || | || Sbjct 761139 TGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCA 761198 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024 || ||||| || || || ||||| || || ||||| | || ||||| || | Sbjct 761199 GTATAAGTCTGTCCGCCACAAATTCAATGTACTGCTTCATTAAAGTGCAGTTCATCCCGA 761258 Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084 | || || ||||| | ||||| || || ||||| ||||| || |||| |||| || | Sbjct 761259 TGAGATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTGACTGCATTGACAA 761318 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATG 48144 |||| | | || | | ||| ||| || | || |||||| ||||||||||| | Sbjct 761319 TTATTTCTCTGACTCTCTGCTCCAAAGGTTTATGTACCAGATGTTTGAACATTAAACACG 761378 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 ||||||||||||| || || |||||||| ||||||| | || |||||||| ||||| | Sbjct 761379 CAAAATCACAATGGAGTCCCTCATCTCTGCTAATTAGCTTATTCGAAAATGTAAGACCAG 761438 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| | ||| ||||| || ||||| ||||| | || ||||| |||||| |||| || | Sbjct 761439 GCATCAATCCTCGTTTCTTAAGCCAGAATATGGATGCAAAAGAACCAGAATAGAAGATTC 761498 Query 48265 CTTCTACGGCCGCAAATGCGG-TAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATC 48320 |||| || || ||| || || | | ||||| || ||||||| |||| ||| Sbjct 761499 CTTCCACTGCTCTAAAGGCTCCTACATGT-TCTCCATAGGTGGCTTCTTTGTCCCCAATC 761557 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380 || || |||||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct 761558 CAGCGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAG 761617 Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440 || || | | || ||| |||||||| ||||| || | ||||| |||||||| Sbjct 761618 AGGAATTCCCTCTCTTTGGAATCTTTAA-----GTATCGATGAGGAGACTGTACATTTCA 761672 Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500 ||||| || ||||| || || ||||| || || || ||||| || |||||||| ||||| Sbjct 761673 GAGTGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCTGGCTTCTGTAATCTGA 761732 Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 || || | ||| || || | || || ||||| ||||| |||||||| || || || Sbjct 761733 ACTTCTTGGCTAAACCGCTCCACAAAGTTTTCATTCACTATGCCATCACTGGCCGCGAAG 761792 Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620 || || | ||||| ||||||||| | || | | |||| | ||||| | | Sbjct 761793 AAAGCCAGCACATGGGATATAAAATATCTCTCCTCAGGTTTCAGGGCCTCCCAGTGCTGG 761852 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 || || || || | || || || ||||||||||||| ||| ||||| ||||| |||||| Sbjct 761853 ATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAGTGAAGCCTCGGCTTTCTTATAC 761912 Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 || | ||| |||||| ||||| ||| || || || ||||| Sbjct 761913 ATCTGCCAAATATCATGGTATTCGATGGGAAAGATGACAAA 761953 >seq635 Length=1382696 Score = 273 bits (302), Expect = 3e-68 Identities = 348/474 (73%), Gaps = 5/474 (1%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || || || ||| ||| ||| ||| |||| | || ||||||||| ||||| || | | Sbjct 1180144 GTGAATTGGATGGGATAAGCTGCTGGTCTTGTCCTTAAATAGTACATTCCAGTCTTCAAA 1180203 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||| | |||| |||||||| ||||| || || || ||| || |||| || | || Sbjct 1180204 CCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGTAATG 1180263 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||||| ||||| |||||||| |||||||| ||||| ||||| |||| || | | Sbjct 1180264 TGGATATTCAGTGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCAGCTTGAGA 1180323 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | || || |||| |||||||| | ||| || | | ||| || | ||||||||||| Sbjct 1180324 ACTGTTTTCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAATT 1180383 Query 77022 T-TTGTAT--TTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | | |||| | || ||||| ||| | | |||| || || || || |||||| Sbjct 1180384 TCTGGTATGCTCTGGATGGATCCATTACACGCAGTAATCTGGTTTTTCATCTCTTCATTC 1180443 Query 77079 CACAATTTCCTCTCTGTTAAAACTC-TAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137 || || || | | | ||| | || | || | ||||||||| || || ||||||||||| Sbjct 1180444 CATAAGCCCCGCCCAG-TAAGATTCTTCAGTAAATGAGGATTTACAATCTGAAATTCTCC 1180502 Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197 || || |||||||||||||| ||||| |||||||| ||||| | ||| ||||| ||||| Sbjct 1180503 CGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGACTCATTATTTCC 1180562 Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 77251 || ||| |||||||| |||||||| ||||| || || | | |||||| || || Sbjct 1180563 CAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTGTTCCT 1180616 >seq339 Length=2552696 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| || || |||||||||||||| ||||| |||||||| ||||| | ||| Sbjct 2056695 TGAAATTCTCCCGATAAGACTCTACGAGTGTAGATATTGCTGGTATAAGGTTCAATAGAC 2056636 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 2056635 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTG 2056576 Query 77247 TTTCTGAGACCAT 77259 || || | |||| Sbjct 2056575 TTCCTTACTCCAT 2056563 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| ||||| || || || ||| || |||| || || || || |||| Sbjct 2059661 TCCAGCCGTAGAAGTGCATACTAGTGAGCTTGCCGTAGTTAGGCTCAGCGATGTGGATAT 2059602 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| |||||||| |||||||| ||||| ||||||||||| || | || || | Sbjct 2059601 TCAATGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCCGCCATCTTGAGAACTGTTT 2059542 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||| | ||| || | | ||| || | ||||||||||| Sbjct 2059541 TCTGAGAGATTTCCCACACAGTCTTATACAGTTGCTTCAGATCATCTGGAA 2059491 Score = 109 bits (120), Expect = 8e-19 Identities = 129/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 78739 CATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTA 78798 || |||| || | ||| |||||||| ||||| | || || ||||| || ||||| || | Sbjct 2031460 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACAGCAATCCTTGCTGCCA 2031401 Query 78799 GAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATAT 78858 | || ||||| ||||| || | ||||| ||||| ||| |||| || || || ||| Sbjct 2031400 GGATGGCATAGTCAGGGTGCTTAGTAGTCAGGGTGGCAGCTGTTTCAGCAGCCAATGTAT 2031341 Query 78859 CTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGAT 78913 | | || | ||| || |||||| |||||| || || ||||||||||||| ||| Sbjct 2031340 CCAGTTCCACAGTGGTAACCCCACTATATAAGCCCTGGATAACTTTCATGGTGAT 2031286 Score = 105 bits (116), Expect = 9e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 |||||||||||||||||||| || ||||| || |||| || || || | || | || Sbjct 2043619 ACTCGTTTCATAAAGAGATCCGGGATCCAAAGGGCAAAGAAGAGGTCCCTGGCCCGCTGC 2043560 Query 78063 TCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 ||||| ||||||||||| || |||||| || || ||||| | || || |||||||||| Sbjct 2043559 TCTTCCTTTCCTGTATTTTTCTTTAAG-TCAAGGAACTCAAAGATGTCTAAATGCCATGG 2043501 Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCG 78151 ||| ||||| || || | | |||||||| Sbjct 2043500 TTCCAGATAAATAGCAAAGGCCCCAGGTCG 2043471 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || |||||||| | || || || ||||| || ||||| || ||||| || || ||| Sbjct 2034945 GTACCAGCATTAAAGAGAGTAGGGGAGGCATGGGTGAACCACTTCTCAGAGAGAAGGTTG 2034886 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || |||||||| || | || | ||||||| Sbjct 2034885 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATTCCCACTGAAACCCTCATCAAC 2034826 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 || || || ||||||||| || Sbjct 2034825 ATGTGTTGTGGTCTTTCAGCC 2034805 Score = 86.0 bits (94), Expect = 9e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||| ||| ||||||||| ||||||||||| ||||||| ||||| || |||||||| || Sbjct 2044402 ATACAGCTTTTCAAATTCTTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACA 2044343 Query 77975 CATCAATGACCAGTC 77989 |||||| |||||||| Sbjct 2044342 CATCAAAGACCAGTC 2044328 >seq446 Length=2046506 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||||| || || |||||||| ||||| ||||| ||||| ||||| ||| Sbjct 492608 TCATCTCTGCTAATTAGCTCATTTGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCTTG 492549 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 492548 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGC 492490 Score = 96.9 bits (106), Expect = 5e-15 Identities = 110/145 (76%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTC 47844 |||| |||| |||||| |||| || | |||| || || |||| ||||| || | Sbjct 493943 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCACGC 493885 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| | ||||| || || || | ||||| || || |||||||||||||||||||| | Sbjct 493884 CCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAA 493825 Query 47905 TATTTTCCATAAAATCAAATGGATT 47929 | || |||||||| ||||||||||| Sbjct 493824 TGTTCTCCATAAAGTCAAATGGATT 493800 >seq92 Length=5367877 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| || || | || || ||||| ||||| || ||||| || || | ||||| Sbjct 3850916 CTTCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGGCCTCTTTTTT 3850857 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | ||||||||||| || ||||||||||| |||||||| || |||||||| || || || | Sbjct 3850856 TTAGCCAAAATATAGCAGCGAAAGATCCTGAAAAGAAAATTCCTTCTACAGCAGCGAAGG 3850797 Query 48283 C 48283 | Sbjct 3850796 C 3850796 >seq956 Length=748348 Score = 89.7 bits (98), Expect = 7e-13 Identities = 148/211 (70%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTC 47844 |||| |||| |||||| |||| || | |||| || || |||| ||||| || Sbjct 286050 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAGTTGTCCG-TTGAACTTGACATCACGG 286108 Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904 |||| | ||| | || || || | ||||| || || |||||||||||||||||||| | Sbjct 286109 CCATCCTCTGAAACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTGCCTTCCAATGAAA 286168 Query 47905 TATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964 | || |||||||| ||||||||||| || | | ||| || | || || | || Sbjct 286169 TGTTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAGCCCAGCTCCA 286228 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATA 47995 || ||||| || || |||||||| || || Sbjct 286229 GTATGAGTCTGTCGGCCACGAATTCAATGTA 286259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694618410461920