Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1525 327 1e-84 seq36034 212 8e-50 seq25410 178 2e-39 seq3603 134 2e-26 seq512 125 9e-24 seq549 123 3e-23 seq7076 105 8e-18 seq27717 100 4e-16 seq1670 98.7 1e-15 seq3798 82.4 1e-10 >seq1525 Length=329219 Score = 327 bits (362), Expect = 1e-84 Identities = 627/924 (68%), Gaps = 6/924 (1%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT 33292 ||| |||||| |||| || | ||| ||| ||| || |||| |||||||| | Sbjct 305224 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGGACAKCACTCCCATCYT 305165 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || | || || || || ||||| || ||||||| ||| ||||| || Sbjct 305164 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 305105 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 ||| || ||||| ||||| || | ||| || |||| |||| || || | Sbjct 305104 CATAAAGTCAAATGGATTTTCTACTCAGAAAACCTTGCTAAAACCCAGCTCCAGCATAAG 305045 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 ||| ||||| | ||||| || || ||||||| |||||||||| || ||||| || Sbjct 305044 TCTGTCTGCCAGGAATTTGATGTACTGCTTCATCAAAGCACAATTCATCCCGATGAGCTT 304985 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 |||| ||| | || || || ||||| | || ||| | || || Sbjct 304984 CACTGTTGAGGCCTCCGTGAGGCGCTCCTGTTCTAGCCTAACTGCACTGACGATTATTTC 304925 Query 33533 TCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATC 33592 | | || | | || ||| |||| | ||||| ||||||| || || || || Sbjct 304924 TTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTC 304865 Query 33593 GCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAG 33652 ||||| | |||||||||||| ||||| | ||| || ||||| ||||| |||||||| || Sbjct 304864 ACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAG 304805 Query 33653 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTAC 33712 || || || || ||||| ||||| || || || || || ||||||||||| ||||| || Sbjct 304804 TCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCAC 304745 Query 33713 TGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTG 33769 ||| |||||||| || | | |||||||| | | | |||| | ||||| Sbjct 304744 TGCGGCAAAGGCTATGACACGTTCTCCATACGTAGCCTCTGTGTCCTCGATCCAGCGCAA 304685 Query 33770 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 33829 |||||||| |||||||| |||||||||||||| || || ||||| || |||||| | | Sbjct 304684 GGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCAATGGCGTTGAAGAGAGATTC 304625 Query 33830 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33889 |||| || ||||||||| ||||| || | | |||||||||||||||||||| || Sbjct 304624 CCTTTCTTTGGAATCTTTAACGTAAGTGTCATTGAGGAGACTATACATTTCCGAATGTAT 304565 Query 33890 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 33949 |||||| ||||| || || || || |||||| | || || || ||||| ||||| Sbjct 304564 GTTTTCCATGGCAATTTGGAAGCCATAGAAATCACGGGCTTCCGTCATCTGAGCTTCTTG 304505 Query 33950 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAA 34009 | || || || | | |||||||| |||| |||||||| |||||| | || |||| Sbjct 304504 GCTAAGCCGCTCCACCAGGTTTTCATTTACTACGCCATCACTTGCTGCAGAGAAAGCCAG 304445 Query 34010 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 34069 ||||| || |||| | | || || || | || | || | | || || | Sbjct 304444 GACATGCGAAATGAAATGTCTCTCCTCAGGCTTCAGGGCTTCCCGGTGCTGAATGTCCTA 304385 Query 34070 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 34129 || | ||||| || || | ||||| | || ||||| || | ||| |||| | ||| Sbjct 304384 GGAAAGGTCCACCTCCTCAGCCGTCCAGCAGGAAGCCTCAGCGTGCTTACACATCTGCCA 304325 Query 34130 GATGTCATGATATTGGATTGGGAA 34153 | ||| | |||| ||| || || Sbjct 304324 AACATCACGGTATTCGATAGGAAA 304301 >seq36034 Length=1448 Score = 212 bits (234), Expect = 8e-50 Identities = 405/595 (68%), Gaps = 9/595 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT 33292 ||| |||||| |||| || | ||| ||| ||| || ||||| |||| ||| | Sbjct 608 TTAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGGACATCACTCTCATCCT 549 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || | || || | || ||||| || ||||||| ||| ||||| | Sbjct 548 CTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCCC 489 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 ||| || ||||| ||||| || || ||| || |||| |||| || || | Sbjct 488 CATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGCTCCAGCATAAG 429 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 ||| ||||| || ||||| || || ||||||| |||||||| || ||||| || Sbjct 428 TCTGTCTGCCACAAATTCGATGTACTGCTTCATCAAAGTGCAATTCATCCCAATGAGCTT 369 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 ||||| || ||| | || || || || ||||| || || ||||| || || Sbjct 368 CACTGGCAGGGCCTCCGTGAGGAACTCCTGTTCTATCCTAACTGCATTGACGATTATTTC 309 Query 33533 TCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATC 33592 | | || | | || ||| |||| | ||||| ||||||| || || || || Sbjct 308 TTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTC 249 Query 33593 GCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAG 33652 ||||| | |||||||||||| ||||| | ||| || ||||| ||||| | |||||| || Sbjct 248 ACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCTGGGCATCAG 189 Query 33653 GCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTAC 33712 || || ||||| ||||| ||||| || || || || || ||| ||||||||||| || Sbjct 188 ACCTCGTTTTTTGAGCCAGAATATCGATGCAAAAGAACCAGAA---AAGATTCCTTCCAC 132 Query 33713 TGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTG 33769 |||| ||||||| | | |||||||| | | | |||| ||||| Sbjct 131 TGCAACAAAGGCTGCGACACGTTCTCCATACGTAGCCTCTTTGTCCCCGATCCAGCACAA 72 Query 33770 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33824 |||||||| | |||||| |||||||||||||| || || || || || |||||| Sbjct 71 GGCCCAATCTGTCTTCTTCTTTACACAAGGCATTGTCTCAATAGCGTTGAAGAGA 17 >seq25410 Length=10104 Score = 178 bits (196), Expect = 2e-39 Identities = 217/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 |||||||||||||| ||||| |||||||| ||||| || || || || |||||||| Sbjct 10102 AGACTATACATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAATGG 10043 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986 || || |||||||| |||||| | ||| || || | || ||||||| ||||| ||| Sbjct 10042 GCTTCCGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGCTTTCATTTACTATGCCA 9983 Query 33987 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 34046 ||||| |||||||| || |||| ||||| || |||||| | || || || | || Sbjct 9982 TCACTTGCTGCAAAGAAAGCCAGAACATGCGAAATGAAATATCTCTCCTCAGGCTTCAGG 9923 Query 34047 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 34106 | ||| | | || || || || | ||||| ||||| |||||||||| || ||| Sbjct 9922 GCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCTTCAGCTGTCCAAAAGGAAGCC 9863 Query 34107 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || || || |||||||| | ||| || ||||| |||| ||| || || || ||||| Sbjct 9862 TCAGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATAGGAAAGATGACAAA 9807 >seq3603 Length=202440 Score = 134 bits (148), Expect = 2e-26 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || ||||||||||| ||||| | Sbjct 28560 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATT 28501 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 28500 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAA 28441 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 28440 CTGTTTCTTATACCATA 28424 Score = 105 bits (116), Expect = 8e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || | || || || |||| ||| || || || || || || | Sbjct 24207 CATAGGTTTCATATGGGCCATACTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 24148 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||||||||||||||||| |||||| | || || ||||| || ||||| || | Sbjct 24147 AATAAATGGTTTCAAAGATCTGCTTATTCAATAACTGGGCCTCCGGACTCTCAAAAGGGT 24088 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62803 | | | |||||||| || || || | ||||| || ||||| || || || | ||| Sbjct 24087 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATG 24030 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| ||||||||||| || | || || || || | | Sbjct 19861 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 19802 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 || || || |||||||| ||||| || | ||| |||||| | | || || ||||||| Sbjct 19801 CTGCTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 19742 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 19741 AGGCTCCAGGTAAATAGC 19724 Score = 82.4 bits (90), Expect = 1e-10 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||| | || |||||| ||| | | | ||| |||||||| ||| || Sbjct 8241 ATGTAGCTGCCAGTAGCTCGAATACAACTCACAGCAACACCAATTCCCCCAGCCGACTTG 8182 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 || || ||||| || | |||| |||||||| |||||||| ||||||||||| |||| Sbjct 8181 GATATCAATGCACACTGCTTTAGAGTGTCATAAATGCCTTCAATGCTATCATCTTTCATA 8122 Query 63627 TTAAGTAGAAAACAGCTA 63644 | || || ||||||||| Sbjct 8121 CTCAGAAGGAAACAGCTA 8104 >seq512 Length=523212 Score = 125 bits (138), Expect = 9e-24 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||| | | ||| ||| | |||||||| || ||||||||||||| ||| Sbjct 180941 GTTACTTTCTATGACGTGTATATTGTTCTGCAAGCTTTTATACTGACTACTGCAGTATTT 180882 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | ||||| ||||||||||||||| |||||||||||||| ||| ||| | |||| Sbjct 180881 CTTGGTTTGACTGTATGTACTCTACAATCTAAGAGAGATTTCAGCAAATTTGGAGCAGG 180823 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437 |||||| | || ||||||||||| ||||||||| |||||||||| |||||||| || ||| Sbjct 184597 GGATCTTTGGGTTTGATTTTCGCCTTGACTTTAAACAGACATAAGCATCCCCTTAACCTG 184538 Query 188438 TACCTACTTTGTGGATTT 188455 ||||| |||| ||||||| Sbjct 184537 TACCTGCTTTTTGGATTT 184520 Score = 95.1 bits (104), Expect = 2e-14 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 ||||||||||||||||||||||||||||||| ||||| ||||| || |||| ||||||| Sbjct 194026 TGCTCCTCCATCGAGGACGACTTCAACTATGGCAGCTGCGTGGCCTCCGCCAACGTGCAC 193967 Query 188232 ATACGAATGG 188241 || ||||||| Sbjct 193966 ATCCGAATGG 193957 >seq549 Length=511996 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| ||||| | ||| || ||||| ||||| |||||||| || || || |||| Sbjct 260455 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGACCTCGTTTTT 260514 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||| ||||| ||||||| Sbjct 260515 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 260574 Query 33724 C 33724 | Sbjct 260575 C 260575 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 262451 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGGATGTTTTCCATGGC 262510 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 || || || || |||||||| | || || |||||||| |||||| Sbjct 262511 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 262556 >seq7076 Length=122421 Score = 105 bits (116), Expect = 8e-18 Identities = 179/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 31299 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 31356 ||| || || ||||| ||| ||| | ||| | ||| ||||| | ||| ||||| Sbjct 32540 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTCAGTGTC--ATCTAAAACTTGAACTTCC 32483 Query 31357 TCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31416 || | |||||| ||| |||| |||| | | || ||||| || |||| ||| || | || Sbjct 32482 TCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGGGCAATTCGATCACCCTTTTTG 32423 Query 31417 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31476 || | |||| | ||| ||| ||||| || | || || | ||||| ||||||||| Sbjct 32422 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCT 32363 Query 31477 TCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACCAGACCTAGGA 31533 || ||||| ||||| |||||| ||| || | |||| | || ||||| | ||| Sbjct 32362 TCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGA 32303 Query 31534 GCTATTCTACCATAGCA 31550 |||| ||| |||||||| Sbjct 32302 GCTACTCTCCCATAGCA 32286 >seq27717 Length=6327 Score = 100 bits (110), Expect = 4e-16 Identities = 178/257 (69%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 31299 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 31356 ||| || || ||||| ||| ||| | ||| | ||| ||||| | ||| ||||| Sbjct 4398 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTCAGTGTC--ATCTAAAACTTGAACTTCC 4341 Query 31357 TCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31416 || | |||||| ||| |||| |||| | | || ||||| || |||| ||| || | || Sbjct 4340 TCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGGGCAATTCGATCACCCTTTTTG 4281 Query 31417 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31476 || | |||| | ||| ||| ||||| || | || || | ||||| ||||||||| Sbjct 4280 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCT 4221 Query 31477 TCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACCAGACCTAGGA 31533 || |||| ||||| |||||| ||| || | |||| | || ||||| | ||| Sbjct 4220 TCATCTACGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGA 4161 Query 31534 GCTATTCTACCATAGCA 31550 |||| ||| |||||||| Sbjct 4160 GCTACTCTCCCATAGCA 4144 >seq1670 Length=315515 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| || ||||| ||||| || || | || || Sbjct 206376 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 206435 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 206436 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 206494 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 |||||||||||||| ||||| ||||||||||||||||| || || | || |||||| Sbjct 210684 AAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 210743 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 34081 || || || |||| | | || || ||||| | | || ||| || |||| ||| || Sbjct 210744 TACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAATCAAC 210799 >seq3798 Length=195893 Score = 82.4 bits (90), Expect = 1e-10 Identities = 176/258 (68%), Gaps = 9/258 (3%) Strand=Plus/Plus Query 31300 CCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTT 31357 ||||| || ||||| ||| ||| | ||| || | || ||||| | ||| ||||| | Sbjct 80051 CCTGTAGAACCAAAACCTCCTGAACCCCT-TA-CAGTGTCATCTAAAACTTGAACTTCCT 80108 Query 31358 CAAGTTCTGGATAATATATAC--GTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATT 31415 | | |||||| ||| | | | ||| | | || ||||| || ||| |||| | | || Sbjct 80109 CTATTTCTGGGTAAAAAAAATCTGTTCACAAATGAGCTGTGCAATTTTATCACACTTTTT 80168 Query 31416 TACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATC 31475 ||| | |||| | ||| ||| ||||| || | || || | ||||| |||||||| Sbjct 80169 TACTTCAAACTTTTCTTTGCCACAATTAAATAGTACAACACCAACATTTCCTCTATAATC 80228 Query 31476 TTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAGACCAGACCTAGG 31532 ||| ||||| ||||| || ||| ||| || | |||| | || | ||| | || Sbjct 80229 TTCATCTATGACACCAGCTTCTACATCTATGAAGTGTTTTGCAGCCAAGCTAGAACATGG 80288 Query 31533 AGCTATTCTACCATAGCA 31550 ||||| ||| |||||||| Sbjct 80289 AGCTACTCTCCCATAGCA 80306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629367256797840