Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3100 118 9e-22 >seq3100 Length=222275 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 157965 GGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGATGCCACAGGCT 157906 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || || || ||| |||| || || ||||| || |||||||| || ||||||||||| Sbjct 157905 GAGAACCATGGCCCCAACATCAAGGAGCACGTGAACTCCCTGGGGGAGAAGCTGAAGACC 157846 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||| | ||||| Sbjct 157845 CTCAGGCTGAGGCTGAGGCGCTG 157823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429754582602536