Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq3100 152 6e-32
>seq3100
Length=222275
Score = 152 bits (168), Expect = 6e-32
Identities = 117/139 (84%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || ||||||||||||||||||||||| || |
Sbjct 157976 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 157917
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
||||||||||||| || || | |||| || ||| |||||||||||||| ||||| ||||
Sbjct 157916 TGCCACAGGCTGAGAACCATGGCCCCAACATCAAGGAGCACGTGAACTCCCTGGGGGAGA 157857
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| |||||
Sbjct 157856 AGCTGAAGACCCTCAGGCT 157838
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || || || |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 155627 AGCTCCAAGAGAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 155568
Query 10419 TAGAAGCATACATGAC 10434
||||||| ||||||||
Sbjct 155567 TAGAAGCCTACATGAC 155552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546987803345280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |