Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3603 96.9 9e-15
seq1525 93.3 1e-13
>seq3603
Length=202440
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 21027 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 21086
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 21087 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTAGGAACGATCAAATGC 21146
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 21147 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 21179
>seq1525
Length=329219
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/192 (71%), Gaps = 3/192 (2%)
Strand=Plus/Plus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || ||||| | ||| || | | | | |||
Sbjct 304664 AAGAAGAAGGCAGATTGGGCCTTGCGCTGGATCGAGGACACAGAGGCTACGTATGGAGAA 304723
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
||| | || || ||||| | || |||||||| ||||||||||| | ||| | ||
Sbjct 304724 CGTGTCATAGCCTTTGCCGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATA 304783
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|| ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||||||
Sbjct 304784 TTCTGGCTCAAGAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGC 304843
Query 22612 CGAGATGAGGGT 22623
|||| ||||||
Sbjct 304844 AGAGACGAGGGT 304855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302398354632746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |