Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq41499 86.0 5e-12
seq18093 84.2 2e-11
>seq41499
Length=968
Score = 86.0 bits (94), Expect = 5e-12
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 104593 TATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATA 104652
|| |||||||||| || ||||| || |||||||| || ||||| |||||||| | ||||
Sbjct 898 TACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCATA 839
Query 104653 AATTCGAAAGGATTCAA-AGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711
|| || || ||||| | ||| |||| || | | ||| |||| | || ||||
Sbjct 838 AAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCA-GCTCCAGCATAAGTCT 780
Query 104712 ATCCGCCACAAATTCGATGTACT 104734
|| ||||| |||||||||||||
Sbjct 779 GTCTGCCACRAATTCGATGTACT 757
>seq18093
Length=33488
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | || || || || || ||||| || | || ||| | || || ||| |
Sbjct 3030 CAAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCC 2971
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| |||||||||||| | || || ||||| || ||||||||||| || || ||
Sbjct 2970 CAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGA 2911
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|| ||||| || || | | ||||| || || ||||||| | | | |||||
Sbjct 2910 CCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTA 2851
Query 24167 TAACATTCAAAAAGAATCTAC 24187
||||| || ||||| |||||
Sbjct 2850 CAACATCCAGAAAGAGTCTAC 2830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429636265146465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |