Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq18093 91.5 1e-13
seq561 82.4 6e-11
>seq18093
Length=33488
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| || || || || || | || || || ||||| ||| | || |||| ||
Sbjct 3029 AAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 2970
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| ||||| | | | || || || || |||||||||||| ||||| |||
Sbjct 2969 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGAC 2910
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| || || || | ||| |||||||| | ||||||| | | || | | |||||
Sbjct 2909 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTAC 2850
Query 115463 AACATTCAAAAAGAGTCTAC 115482
||||| || |||||||||||
Sbjct 2849 AACATCCAGAAAGAGTCTAC 2830
>seq561
Length=508305
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||| ||||| || || || || || || || ||||| || |||| || ||
Sbjct 125667 AATATGCAGATTTTCGTGAAGACCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCC 125726
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|||| || | | | | ||||| || || || || ||||| | || |||
Sbjct 125727 TGCGATACAATAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 125786
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 125787 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 125846
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| |||| ||| | ||| | ||||||||| | || || ||
Sbjct 125847 AACATTCAAAAGGAGTTCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 125896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425047466512360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |