Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1014 109 5e-19
>seq1014
Length=401283
Score = 109 bits (120), Expect = 5e-19
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||| || || ||||||| | || || ||| | |
Sbjct 41719 ATGCAGATCTTAGTGAAGACCTTGACGGGCAAGACCATCACTCTAGAGGTCGAGCCCAGT 41660
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || ||| | || |||| |||| || ||||| || || || |||||||||
Sbjct 41659 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 41603
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||||| | ||||| || |||||||| | || |||| |||||| || || ||
Sbjct 41602 CAGCAGCGTCTGATTTTCGCGGGCAAACAGCTGGAGGATGGCCGCACTCTGTCAGACTAT 41543
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||| || ||||| ||||| || || || |||||
Sbjct 41542 AATATCCAGAAAGAGTCCACCCTGCACTTGGTGCT 41508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433025900374445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |