Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq18093 154 3e-32 seq393 154 3e-32 seq3456 152 9e-32 seq17051 149 1e-30 seq1014 143 5e-29 seq10582 140 6e-28 seq2543 140 6e-28 seq561 140 6e-28 seq3119 123 5e-23 seq2861 104 4e-17 seq5560 102 2e-16 seq3799 102 2e-16 seq25264 86.0 1e-11 seq2432 86.0 1e-11 >seq18093 Length=33488 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || |||||||| Sbjct 2818 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 2877 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || ||||| || || |||||||| || || || Sbjct 2878 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 2937 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| | || || |||| ||||||||| || Sbjct 2938 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 2997 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || | |||||| ||||| ||||||||| || Sbjct 2998 CCAGTCAAGGTCTTCACGAAGATCTGCATTTTG 3030 >seq393 Length=578971 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || || ||||| |||||||| ||||| || || || | |||||||| Sbjct 168899 ACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 168958 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || ||||| || || ||||||||||| || || Sbjct 168959 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGG 169018 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || |||||||||||| | || || |||| ||||||||| || Sbjct 169019 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 169078 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| || || ||||||||| || Sbjct 169079 CCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 169111 >seq3456 Length=207676 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||| |||| ||||||| ||||| || || || | |||||||| Sbjct 50564 ACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAAAGAGTGCAGCCATCTTCC 50623 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || || || || || ||| | || || ||||||||||| || || Sbjct 50624 AGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGGATGCCTTCCTTATCCTGG 50683 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| || || || |||| ||||||||| || Sbjct 50684 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTG 50743 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| ||||| |||||||| Sbjct 50744 CCGGTCAGGGTCTTCACGAAGATCTGCAT 50772 >seq17051 Length=38469 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || |||||||| ||||| ||||| || || || Sbjct 11473 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 11414 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || || |||||||| ||||| | ||| Sbjct 11413 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGA 11354 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||| ||| || || || || | | ||| || Sbjct 11353 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACC 11294 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || ||||| |||||||| ||||| |||||||| Sbjct 11293 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 11247 >seq1014 Length=401283 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || ||||||||||| ||||| ||||| || || Sbjct 41493 CCACCTCGCAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 41552 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || || ||||| || || | || ||||| ||||| Sbjct 41553 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGGG 41612 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || || ||||| ||| |||||||| | || || Sbjct 41613 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 41672 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || ||||| | |||||| || || |||||||| Sbjct 41673 TCTAGAGTGATGGTCTTGCCCGTCAAGGTCTTCACTAAGATCTGCAT 41719 >seq10582 Length=81843 Score = 140 bits (154), Expect = 6e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | ||| || | || |||||| |||| ||||| ||||| || || || | || Sbjct 38523 GAAGTCTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 38582 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 |||||||| | ||||| || || || || |||||||| ||||| || ||||| |||| Sbjct 38583 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 38642 Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421 ||||||| || | ||| ||||| ||| || || || || | | ||| || || | | Sbjct 38643 CCTTGTCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAG 38702 Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| || ||||| |||||||| ||||| |||||||| Sbjct 38703 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 38742 >seq2543 Length=251032 Score = 140 bits (154), Expect = 6e-28 Identities = 156/207 (75%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || | || | || ||||| Sbjct 121601 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCAGCCGTCTTCC 121660 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || |||||||| ||| |||||||||| || || Sbjct 121661 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA-TGCCTTCCTTATCCTGG 121719 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || || ||||||||| | || || |||| |||||||| || Sbjct 121720 ATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTG 121779 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGC 68459 ||||| |||||||| |||| |||||| Sbjct 121780 CCCGTCAGGGTCTTCCCGAAGATCTGC 121806 >seq561 Length=508305 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || ||| |||| ||||| ||||| || || || Sbjct 125896 CCACCACGAAGTCTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGAC 125837 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || || |||||||| ||||| || ||| Sbjct 125836 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 125777 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||| ||| || || || || | ||| || Sbjct 125776 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACC 125717 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || |||||||| ||||| |||||||| Sbjct 125716 TCGAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 125670 >seq3119 Length=221544 Score = 123 bits (136), Expect = 5e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || |||||||| |||||||| | ||| || || || |||||||| | || Sbjct 196877 GTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGATG 196818 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || ||||| || || || ||||| ||| |||||||||| || || ||||| Sbjct 196817 CTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAGGA-TGCCTTCCTTATCCTGGATCTT 196759 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||| || | |||| |||| | ||||| |||| ||||||||| || | || Sbjct 196758 GGCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGT 196699 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 | |||||| ||||| || |||||| Sbjct 196698 CAAGGTCTTCACGAAGATTTGCATT 196674 >seq2861 Length=233481 Score = 104 bits (114), Expect = 4e-17 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| ||||||||||| |||||||| | || |||||| || |||||||| Sbjct 226392 ACCAAGTGTAGGGTGGACTCTTTCTGGATGTTGTTGTCTGAGAGTT--CTACCATCTTCC 226335 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||| || || || || || || ||||| || | |||| ||||||||||| Sbjct 226334 CACTGTTTGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGGTGCCCTCCTTGTCTTGG 226275 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || |||| ||| | || || || | |||| |||| || Sbjct 226274 ATTTTGGCTTTGACATTCTTTATGGCGTCACTGGGCTCCACCTCAAGGGTGGTGGTCTTG 226215 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || | |||||||| Sbjct 226214 CCTGTCAGGGTCTTCACACAGATCTGCAT 226186 >seq5560 Length=149305 Score = 102 bits (112), Expect = 2e-16 Identities = 156/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | || ||| | || || || ||||| ||||| ||||| || || || | || | Sbjct 93415 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 93356 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 |||||||| | ||||| || || || || |||||||| ||||| || ||||| |||| Sbjct 93355 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 93296 Query 68362 CCTTGTCTTGAATCTTTGCCTTGAC-GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 ||||||| || |||| ||||| || || || | || | | ||| || || | Sbjct 93295 CCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGCATCCGAGGGTTCAACCTCGAGA 93236 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| | || || |||||||| | ||| |||||||| Sbjct 93235 GTGATGCCCATCCCTGTCAGGGTCTTCAAGAAAATCTGCAT 93195 >seq3799 Length=195891 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||| | ||||| || || || | || ||||| Sbjct 103705 ACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAAGAGTGCGGCCGTCTTCC 103646 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || || || || || |||||||| || || | | Sbjct 103645 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGGGGGATGCCTTCTTTATCCTCA 103586 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||| ||||| | | |||||||||||| Sbjct 103585 ATCTTGGCCTTCATGTTCTCGATGGTGTC 103557 >seq25264 Length=10399 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||||| || || || || |||||||| ||||| || | ||| |||||| Sbjct 6725 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCC 6784 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||| || || | || || | || || | | ||| Sbjct 6785 TTGTCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCAAGGGCTCAACCTTGAGAGTG 6844 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 |||| | |||| || |||||||| ||||| ||||||| Sbjct 6845 ATGG-TCTTCCTGTCAGGGTCTTCACGAAAATCTGCA 6880 >seq2432 Length=258626 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| ||| ||||||| ||| |||||||||||||||| Sbjct 14086 GCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 14027 Query 84516 CCCACATCGGGC 84527 | ||||| |||| Sbjct 14026 CTCACATTGGGC 14015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920963405423160