Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq18093 154 3e-32
seq393 154 3e-32
seq3456 152 9e-32
seq17051 149 1e-30
seq1014 143 5e-29
seq10582 140 6e-28
seq2543 140 6e-28
seq561 140 6e-28
seq3119 123 5e-23
seq2861 104 4e-17
seq5560 102 2e-16
seq3799 102 2e-16
seq25264 86.0 1e-11
seq2432 86.0 1e-11
>seq18093
Length=33488
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||||||| |||||||| ||||| || || || ||||||||
Sbjct 2818 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 2877
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || ||||| || || ||||| || || |||||||| || || ||
Sbjct 2878 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 2937
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| ||| |||||||||||| | || || |||| ||||||||| ||
Sbjct 2938 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 2997
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || | |||||| ||||| ||||||||| ||
Sbjct 2998 CCAGTCAAGGTCTTCACGAAGATCTGCATTTTG 3030
>seq393
Length=578971
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || || ||||| |||||||| ||||| || || || | ||||||||
Sbjct 168899 ACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 168958
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || ||||| || || ||||| || || ||||||||||| || ||
Sbjct 168959 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGG 169018
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| || |||||||||||| | || || |||| ||||||||| ||
Sbjct 169019 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 169078
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || |||||||| || || ||||||||| ||
Sbjct 169079 CCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 169111
>seq3456
Length=207676
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || ||| |||| ||||||| ||||| || || || | ||||||||
Sbjct 50564 ACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAAAGAGTGCAGCCATCTTCC 50623
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || || || ||| | || || ||||||||||| || ||
Sbjct 50624 AGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGGATGCCTTCCTTATCCTGG 50683
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| ||| |||||||||||| || || || |||| ||||||||| ||
Sbjct 50684 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGATGGTCTTG 50743
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 50744 CCGGTCAGGGTCTTCACGAAGATCTGCAT 50772
>seq17051
Length=38469
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | ||| || | || || |||||||| ||||| ||||| || || ||
Sbjct 11473 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 11414
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | ||||| || || || || |||||||| ||||| | |||
Sbjct 11413 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGA 11354
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| || ||||| ||||| ||| || || || || | | ||| ||
Sbjct 11353 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACC 11294
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || ||||| |||||||| ||||| ||||||||
Sbjct 11293 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 11247
>seq1014
Length=401283
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || ||||||||||| ||||| ||||| || ||
Sbjct 41493 CCACCTCGCAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 41552
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || || ||||| || || | || ||||| |||||
Sbjct 41553 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGGG 41612
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| || || || ||||| ||| |||||||| | || ||
Sbjct 41613 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 41672
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || ||||| | |||||| || || ||||||||
Sbjct 41673 TCTAGAGTGATGGTCTTGCCCGTCAAGGTCTTCACTAAGATCTGCAT 41719
>seq10582
Length=81843
Score = 140 bits (154), Expect = 6e-28
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301
|||| | ||| || | || |||||| |||| ||||| ||||| || || || | ||
Sbjct 38523 GAAGTCTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 38582
Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361
|||||||| | ||||| || || || || |||||||| ||||| || ||||| ||||
Sbjct 38583 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 38642
Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421
||||||| || | ||| ||||| ||| || || || || | | ||| || || | |
Sbjct 38643 CCTTGTCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAG 38702
Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||||| || ||||| |||||||| ||||| ||||||||
Sbjct 38703 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 38742
>seq2543
Length=251032
Score = 140 bits (154), Expect = 6e-28
Identities = 156/207 (75%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||||||| |||||||| ||||| || | || | || |||||
Sbjct 121601 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCAGCCGTCTTCC 121660
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || ||||| || || |||||||| ||| |||||||||| || ||
Sbjct 121661 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA-TGCCTTCCTTATCCTGG 121719
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| || || ||||||||| | || || |||| |||||||| ||
Sbjct 121720 ATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTG 121779
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGC 68459
||||| |||||||| |||| ||||||
Sbjct 121780 CCCGTCAGGGTCTTCCCGAAGATCTGC 121806
>seq561
Length=508305
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | ||| || | || || ||| |||| ||||| ||||| || || ||
Sbjct 125896 CCACCACGAAGTCTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGAC 125837
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | ||||| || || || || |||||||| ||||| || |||
Sbjct 125836 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 125777
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||||||||| || ||||| ||||| ||| || || || || | ||| ||
Sbjct 125776 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACC 125717
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || |||||||| ||||| ||||||||
Sbjct 125716 TCGAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 125670
>seq3119
Length=221544
Score = 123 bits (136), Expect = 5e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || || |||||||| |||||||| | ||| || || || |||||||| | ||
Sbjct 196877 GTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGATG 196818
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || ||||| || || || ||||| ||| |||||||||| || || |||||
Sbjct 196817 CTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAGGA-TGCCTTCCTTATCCTGGATCTT 196759
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
||||| || | |||| |||| | ||||| |||| ||||||||| || | ||
Sbjct 196758 GGCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGT 196699
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
| |||||| ||||| || ||||||
Sbjct 196698 CAAGGTCTTCACGAAGATTTGCATT 196674
>seq2861
Length=233481
Score = 104 bits (114), Expect = 4e-17
Identities = 149/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||||||||| ||||||||||| |||||||| | || |||||| || ||||||||
Sbjct 226392 ACCAAGTGTAGGGTGGACTCTTTCTGGATGTTGTTGTCTGAGAGTT--CTACCATCTTCC 226335
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||| || || || || || || ||||| || | |||| |||||||||||
Sbjct 226334 CACTGTTTGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGGTGCCCTCCTTGTCTTGG 226275
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| || |||| ||| | || || || | |||| |||| ||
Sbjct 226274 ATTTTGGCTTTGACATTCTTTATGGCGTCACTGGGCTCCACCTCAAGGGTGGTGGTCTTG 226215
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| || | ||||||||
Sbjct 226214 CCTGTCAGGGTCTTCACACAGATCTGCAT 226186
>seq5560
Length=149305
Score = 102 bits (112), Expect = 2e-16
Identities = 156/221 (71%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301
|||| | || ||| | || || || ||||| ||||| ||||| || || || | || |
Sbjct 93415 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 93356
Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361
|||||||| | ||||| || || || || |||||||| ||||| || ||||| ||||
Sbjct 93355 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 93296
Query 68362 CCTTGTCTTGAATCTTTGCCTTGAC-GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420
||||||| || |||| ||||| || || || | || | | ||| || || |
Sbjct 93295 CCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGCATCCGAGGGTTCAACCTCGAGA 93236
Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| | || || |||||||| | ||| ||||||||
Sbjct 93235 GTGATGCCCATCCCTGTCAGGGTCTTCAAGAAAATCTGCAT 93195
>seq3799
Length=195891
Score = 102 bits (112), Expect = 2e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || || |||||||| |||||| | ||||| || || || | || |||||
Sbjct 103705 ACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAAGAGTGCGGCCGTCTTCC 103646
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || ||||| || || || || || || |||||||| || || | |
Sbjct 103645 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGGGGGATGCCTTCTTTATCCTCA 103586
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
||||| ||||| | | ||||||||||||
Sbjct 103585 ATCTTGGCCTTCATGTTCTCGATGGTGTC 103557
>seq25264
Length=10399
Score = 86.0 bits (94), Expect = 1e-11
Identities = 114/157 (73%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||||| || || || || |||||||| ||||| || | ||| ||||||
Sbjct 6725 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCC 6784
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||| || || | || || | || || | | |||
Sbjct 6785 TTGTCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCAAGGGCTCAACCTTGAGAGTG 6844
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460
|||| | |||| || |||||||| ||||| |||||||
Sbjct 6845 ATGG-TCTTCCTGTCAGGGTCTTCACGAAAATCTGCA 6880
>seq2432
Length=258626
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
|||||| |||||||||||| ||||| ||| ||||||| ||| ||||||||||||||||
Sbjct 14086 GCCCGGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTTAGGGTCGTGGGTTCGAGC 14027
Query 84516 CCCACATCGGGC 84527
| ||||| ||||
Sbjct 14026 CTCACATTGGGC 14015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920963405423160
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