Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq561 91.5 1e-13
seq17051 89.7 5e-13
seq10582 82.4 8e-11
>seq561
Length=508305
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 138422 ACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAAT 138481
|||||||||||||||||||||| || |||||| || || ||||| || || | |
Sbjct 125862 ACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAA 125803
Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541
|||| || | || ||||| ||||| || ||||| ||||| ||| || |||| |
Sbjct 125802 AGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGT 125743
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
||| | || ||| | || ||||||| || | || || || ||||| || || |
Sbjct 125742 TTTCTATTGTATCGCAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTCAGGGTCTTCA 125683
Query 138602 CAAAAATCTGCAT 138614
| |||||||||||
Sbjct 125682 CGAAAATCTGCAT 125670
>seq17051
Length=38469
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||||||||||||||| || |||||| || || ||||| || || | |
Sbjct 11440 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 11381
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | || |||| |||| || ||||| ||||| ||| || ||||
Sbjct 11380 AAGATCAGTCTTTGCCGGTCGAGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTTACG 11321
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| ||||| || || | | || ||||||| || | || || || ||||| || ||
Sbjct 11320 TTTTCCATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTC 11261
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 11260 ACGAAAATCTGCAT 11247
>seq10582
Length=81843
Score = 82.4 bits (90), Expect = 8e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 138422 ACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAAT 138481
|||||||||||||||||||||| || |||| | || || ||||| || || | |
Sbjct 38550 ACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAA 38609
Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541
|||| || | || ||||| ||||| || ||||| ||||| || || |||| |
Sbjct 38610 AGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGACCTTGGCCTTTACGT 38669
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
||| | || || | | || ||||||| || | || || || ||||| || || |
Sbjct 38670 TTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCA 38729
Query 138602 CAAAAATCTGCAT 138614
| |||||||||||
Sbjct 38730 CGAAAATCTGCAT 38742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495907553774160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |