Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1014 82.4 7e-11 >seq1014 Length=401283 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAATT 45195 ||||| || || || || ||||||||||| | ||||| | | | ||| |||| | Sbjct 41517 TGCAGGGTGGACTCTTTCTGGATATTATAGT--CTGACAGAGTGCGGCCATCCTCCAGCT 41574 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || ||| | |||| || |||||||| || || ||||| || || ||||| |||| Sbjct 41575 GTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTT 41634 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||||| || | |||||| | |||||| || ||||| | || ||||| | Sbjct 41635 TAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCTAGAGTGATGGTCTTGCCCG 41694 Query 45316 TTAGAGTTTTTACAAAAATTTGCATC 45341 | | || || || || || |||||| Sbjct 41695 TCAAGGTCTTCACTAAGATCTGCATC 41720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451680000761880