Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq1014 95.1 8e-15
>seq1014
Length=401283
Score = 95.1 bits (104), Expect = 8e-15
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| ||||||| ||| || ||||| |||| ||| ||||| || |||||||| || |
Sbjct 41492 GCCACCTCGCAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 41551
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| | ||| |||| |||| ||||| || | ||||| | ||||||||| || | ||
Sbjct 41552 CAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGG 41611
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCC 39669
| ||| || ||||| ||||| ||| | || | | ||||| || ||| |
Sbjct 41612 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCT--CG 41669
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTC 39722
|| || | ||| || || || ||||| || || || || ||||||||||| ||
Sbjct 41670 ACCTCTAGAGTGATGGTCTTGCCCGTCAAGGTCTTCACTAAGATCTGCATCTC 41722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347127427266899
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |