Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq14925 197 5e-45 seq5509 109 2e-18 seq561 100 1e-15 seq17051 96.9 1e-14 seq10582 96.9 1e-14 seq25372 91.5 6e-13 seq1763 89.7 2e-12 seq1608 89.7 2e-12 seq1039 89.7 2e-12 seq362 87.8 7e-12 seq5560 86.0 2e-11 seq1203 84.2 9e-11 >seq14925 Length=49691 Score = 197 bits (218), Expect = 5e-45 Identities = 463/692 (67%), Gaps = 15/692 (2%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| ||||||||||| ||||||| ||| ||||| ||||| | ||| | ||||| || | Sbjct 7834 TTGGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCATCACGGAAAGGTGG 7775 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 |||| || || ||||| ||||| | |||||| ||| | || ||||| ||| Sbjct 7774 AAATAATTGCCAATGATCAAGGGAACCAAACTACACCTAGCTATGTCGCCTTTACTGATA 7715 Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAACACAG 451097 | ||| || | | || | ||||| | | | | | | | ||| ||| ||||| | Sbjct 7714 CCGAACGATTGATCGGTGATGCTGCAAGAACCGAGTTGCAAT-GAATCCCACCAACACGG 7656 Query 451098 TATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGA 451157 | | |||||| ||||| | ||||| || | | |||||||| | ||| || || | Sbjct 7655 TTTTTGATGCCAAACGCCTCATTGGACGAAGATTTGATGATGCTGTTGTCCAGTCTGATA 7596 Query 451158 --AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTA 451213 || ||| | ||| ||| || || ||| | || | ||| | |||||||| Sbjct 7595 TGAAGCATTGGCCCTTC--ATG--GTGGTGAATGACGCAGACAGGCCTAAGGTTCAAGTA 7540 Query 451214 AATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACT 451273 | || || || || || |||| |||| ||| || || | ||||| |||||| | || Sbjct 7539 GAATACAAGGGAGAGACAAAAAGTTTTTATCCAGAGGAGGTGTCATCCATGGTTTTGACA 7480 Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| |||| ||||||| | |||| | ||||| |||| | | || Sbjct 7479 AAGATGAAGGAAATAGCAGAAGCCCACCTTGGGAAGACTGTTACCAATGCTGCTGTCACA 7420 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || |||||||| || |||||| | || || || || || |||||||| ||| ||||||| Sbjct 7419 GTACCCGCTTACTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCT 7360 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || | ||||| ||| || || ||||| || || ||||||||| | || ||||| || Sbjct 7359 GGGCTCAATGTACTTAGA---ATCAATGAGCCAACTGCAGCTGCTATTGCCTATGGCTTA 7303 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | || ||| | || ||||| |||| | | | |||||||| ||||| || ||| Sbjct 7302 GACAA---AAAGGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGTGGCACT 7246 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| || | || | ||||| ||||| | ||||| || || | || ||| Sbjct 7245 TTTGATGTGTCAATCCTCACTATTGAGGATGGAATCTTTGAGGTCAAATCTACAGCTGGA 7186 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| | || |||| || ||||| |||| || Sbjct 7185 GATGCCCACTTAGGTGGAGAAGACTTTGACAA 7154 >seq5509 Length=150509 Score = 109 bits (120), Expect = 2e-18 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 23230 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 23289 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| || |||||| | |||| || ||||| || Sbjct 23290 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCC 23342 >seq561 Length=508305 Score = 100 bits (110), Expect = 1e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | | Sbjct 125670 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTGC 125729 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | || || || || || |||||||||||||||||||| || Sbjct 125730 GATACAATAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 125789 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 125790 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 125849 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| || ||||| | || || ||||| Sbjct 125850 ATTCAAAAGGAGTTCACTCTTCATCTTGTGTTGAGACT 125887 >seq17051 Length=38469 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | || Sbjct 11247 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 11306 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | || || || || || |||||||||||||||| || | Sbjct 11307 GATACAATGGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCTCGACCGG 11366 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 11367 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 11426 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 11427 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 11464 >seq10582 Length=81843 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | || Sbjct 38742 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 38683 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | || || | || || |||||||||||||||||||| || Sbjct 38682 GATACAATAGAAAACGTAAAGGCCAAGGTCCAGGACAAGGAAGGAATTCCTCCTGACCAG 38623 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| |||||| | || || || Sbjct 38622 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAAC 38563 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| || ||||| | || || ||||| Sbjct 38562 ATTCAAAAGGAGTTCACGCTTCATCTTGTGTTGAGACT 38525 >seq25372 Length=10183 Score = 91.5 bits (100), Expect = 6e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || | ||||| || || || || ||||| || || ||| | || Sbjct 9068 ATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTGGAGGTCGAACCCTCG 9127 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | || || || ||||||||||| | ||||||| || | || Sbjct 9128 GATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGATGTAATTCCTTCTAACCAG 9187 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || || ||||| ||||||||| | |||||| | || || || Sbjct 9188 CAAAGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 9247 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 | | | ||||| | || ||||| Sbjct 9248 AGTCAAAAGGAGTCCACTCTTCA 9270 >seq1763 Length=306901 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 420809 TAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACA 420868 |||||| ||||||| ||| ||||| || | | | | || |||||||||||| || || | Sbjct 300813 TAAATAAAACAGTTCTTGCTGGCATGTTAATATCCATAGCAAAAGTTTCAGTGGCAAAAA 300754 Query 420869 AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTA 420928 | | || || ||| || ||| | |||||||| | | ||||||| |||||||||| || Sbjct 300753 AGGCCTTTATCAATCCTTCAGAAAAGAGAATTTCTATAGTTTCTTTCAAAATAGGAAGTA 300694 Query 420929 TACCAGAATGATGA 420942 |||| ||| ||| Sbjct 300693 AACCACCATGGTGA 300680 >seq1608 Length=321383 Score = 89.7 bits (98), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | || Sbjct 105571 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 105512 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | ||| || ||||||||||||||||||||||| || Sbjct 105511 GATACAACAGAAAATGT-------AAAGGCCAGGATAAGGAAGGAATTCCTCCTGACCAG 105459 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || ||||| ||||||||| | |||||| | || | || Sbjct 105458 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCAAAAC 105399 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 | | | ||||| | | ||||| | || || ||||| Sbjct 105398 ACTCAAAAGGAGTCCAGTCTTCATCTTGTGTTGAGACT 105361 >seq1039 Length=395486 Score = 89.7 bits (98), Expect = 2e-12 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || |||||| | || ||| | || Sbjct 351830 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTAAGGTCGAACCCTCG 351889 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 ||| || ||| | | || || || || || ||| |||||||||||||||| || Sbjct 351890 GATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGAAAGGAATTCCTCCTGACCAG 351949 Query 391170 CAACGTTTAATTTTCTCAGGGAAAC-AACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || |||| || | |||| ||||||||| | | |||| | || || || Sbjct 351950 CAAAGACTGATCTTTGCAGGCAAGCAAACTGGAAGATGGACGTATTTTGTCTGACTACAA 352009 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | | ||||| | || || ||||| Sbjct 352010 CGTTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 352048 >seq362 Length=596293 Score = 87.8 bits (96), Expect = 7e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| ||||| | ||||||||||| Sbjct 227690 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 227749 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 227750 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 227790 >seq5560 Length=149305 Score = 86.0 bits (94), Expect = 2e-11 Identities = 151/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | || || ||||| || | || ||||| || |||||| | || Sbjct 93195 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGGCATCACTCTCGAGGTTGAACCCTCG 93254 Query 391110 GATAACATTGAAGCTATTAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| || ||| |||| || | || || |||||||||||||||||||| || Sbjct 93255 GATGCAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 93314 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || ||||| ||||||||| | |||||| | || || || Sbjct 93315 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 93374 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | ||| | ||||| Sbjct 93375 CATTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACT 93413 >seq1203 Length=368362 Score = 84.2 bits (92), Expect = 9e-11 Identities = 169/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 || ||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 6473 TGTAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAAGAAATG 6530 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| |||||| || |||| || || ||| | | ||| |||||| | | Sbjct 6531 GATAAAAGAACTTTAGAAAGAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 6590 Query 96167 CAAATTGCA-CCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225 ||||| ||| || || | ||||||||||||||||||| ||| ||||| || || Sbjct 6591 CAAAT-GCAGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTT 6649 Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTC 96285 ||| || | | || |||||| ||||||| |||| || |||||| || || | Sbjct 6650 AGGTGGTCTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCGCCTTG 6709 Query 96286 ATAGGG 96291 ||| || Sbjct 6710 ATATGG 6715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974270369435924