Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq14925 197 5e-45
seq5509 109 2e-18
seq561 100 1e-15
seq17051 96.9 1e-14
seq10582 96.9 1e-14
seq25372 91.5 6e-13
seq1763 89.7 2e-12
seq1608 89.7 2e-12
seq1039 89.7 2e-12
seq362 87.8 7e-12
seq5560 86.0 2e-11
seq1203 84.2 9e-11
>seq14925
Length=49691
Score = 197 bits (218), Expect = 5e-45
Identities = 463/692 (67%), Gaps = 15/692 (2%)
Strand=Plus/Minus
Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977
|||| ||||||||||| ||||||| ||| ||||| ||||| | ||| | ||||| || |
Sbjct 7834 TTGGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCATCACGGAAAGGTGG 7775
Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037
|||| || || ||||| ||||| | |||||| ||| | || ||||| |||
Sbjct 7774 AAATAATTGCCAATGATCAAGGGAACCAAACTACACCTAGCTATGTCGCCTTTACTGATA 7715
Query 451038 CAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAACACAG 451097
| ||| || | | || | ||||| | | | | | | | ||| ||| ||||| |
Sbjct 7714 CCGAACGATTGATCGGTGATGCTGCAAGAACCGAGTTGCAAT-GAATCCCACCAACACGG 7656
Query 451098 TATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGA 451157
| | |||||| ||||| | ||||| || | | |||||||| | ||| || || |
Sbjct 7655 TTTTTGATGCCAAACGCCTCATTGGACGAAGATTTGATGATGCTGTTGTCCAGTCTGATA 7596
Query 451158 --AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTA 451213
|| ||| | ||| ||| || || ||| | || | ||| | ||||||||
Sbjct 7595 TGAAGCATTGGCCCTTC--ATG--GTGGTGAATGACGCAGACAGGCCTAAGGTTCAAGTA 7540
Query 451214 AATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACT 451273
| || || || || || |||| |||| ||| || || | ||||| |||||| | ||
Sbjct 7539 GAATACAAGGGAGAGACAAAAAGTTTTTATCCAGAGGAGGTGTCATCCATGGTTTTGACA 7480
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|| ||||| |||| ||||||| | |||| | ||||| |||| | | ||
Sbjct 7479 AAGATGAAGGAAATAGCAGAAGCCCACCTTGGGAAGACTGTTACCAATGCTGCTGTCACA 7420
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| |||||||| || |||||| | || || || || || |||||||| ||| |||||||
Sbjct 7419 GTACCCGCTTACTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCT 7360
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453
|| | ||||| ||| || || ||||| || || ||||||||| | || ||||| ||
Sbjct 7359 GGGCTCAATGTACTTAGA---ATCAATGAGCCAACTGCAGCTGCTATTGCCTATGGCTTA 7303
Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513
| || ||| | || ||||| |||| | | | |||||||| ||||| || |||
Sbjct 7302 GACAA---AAAGGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGTGGCACT 7246
Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573
|||| || | || | ||||| ||||| | ||||| || || | || |||
Sbjct 7245 TTTGATGTGTCAATCCTCACTATTGAGGATGGAATCTTTGAGGTCAAATCTACAGCTGGA 7186
Query 451574 GATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| | || |||| || ||||| |||| ||
Sbjct 7185 GATGCCCACTTAGGTGGAGAAGACTTTGACAA 7154
>seq5509
Length=150509
Score = 109 bits (120), Expect = 2e-18
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| ||||||| ||||||| || || |||||||||||||| ||||| || |||||
Sbjct 23230 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 23289
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| || |||||| | |||| || ||||| ||
Sbjct 23290 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCC 23342
>seq561
Length=508305
Score = 100 bits (110), Expect = 1e-15
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || ||||| || || ||| | |
Sbjct 125670 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTGC 125729
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | || || || || || |||||||||||||||||||| ||
Sbjct 125730 GATACAATAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 125789
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 125790 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 125849
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| || ||||| | || || |||||
Sbjct 125850 ATTCAAAAGGAGTTCACTCTTCATCTTGTGTTGAGACT 125887
>seq17051
Length=38469
Score = 96.9 bits (106), Expect = 1e-14
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || ||||| || || ||| | ||
Sbjct 11247 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 11306
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | || || || || || |||||||||||||||| || |
Sbjct 11307 GATACAATGGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCTCGACCGG 11366
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 11367 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 11426
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 11427 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 11464
>seq10582
Length=81843
Score = 96.9 bits (106), Expect = 1e-14
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || ||||| || || ||| | ||
Sbjct 38742 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 38683
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | || || | || || |||||||||||||||||||| ||
Sbjct 38682 GATACAATAGAAAACGTAAAGGCCAAGGTCCAGGACAAGGAAGGAATTCCTCCTGACCAG 38623
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| |||||| | || || ||
Sbjct 38622 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAAC 38563
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| || ||||| | || || |||||
Sbjct 38562 ATTCAAAAGGAGTTCACGCTTCATCTTGTGTTGAGACT 38525
>seq25372
Length=10183
Score = 91.5 bits (100), Expect = 6e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || || | ||||| || || || || ||||| || || ||| | ||
Sbjct 9068 ATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTGGAGGTCGAACCCTCG 9127
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| | ||| | | || || || ||||||||||| | ||||||| || | ||
Sbjct 9128 GATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGATGTAATTCCTTCTAACCAG 9187
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | || ||||| | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 9188 CAAAGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 9247
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
| | | ||||| | || |||||
Sbjct 9248 AGTCAAAAGGAGTCCACTCTTCA 9270
>seq1763
Length=306901
Score = 89.7 bits (98), Expect = 2e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 420809 TAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACA 420868
|||||| ||||||| ||| ||||| || | | | | || |||||||||||| || || |
Sbjct 300813 TAAATAAAACAGTTCTTGCTGGCATGTTAATATCCATAGCAAAAGTTTCAGTGGCAAAAA 300754
Query 420869 AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTA 420928
| | || || ||| || ||| | |||||||| | | ||||||| |||||||||| ||
Sbjct 300753 AGGCCTTTATCAATCCTTCAGAAAAGAGAATTTCTATAGTTTCTTTCAAAATAGGAAGTA 300694
Query 420929 TACCAGAATGATGA 420942
|||| ||| |||
Sbjct 300693 AACCACCATGGTGA 300680
>seq1608
Length=321383
Score = 89.7 bits (98), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 7/218 (3%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || ||||| || || ||| | ||
Sbjct 105571 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 105512
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| | ||| | | ||| || ||||||||||||||||||||||| ||
Sbjct 105511 GATACAACAGAAAATGT-------AAAGGCCAGGATAAGGAAGGAATTCCTCCTGACCAG 105459
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | || || | || || ||||| ||||||||| | |||||| | || | ||
Sbjct 105458 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACCAAAAC 105399
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
| | | ||||| | | ||||| | || || |||||
Sbjct 105398 ACTCAAAAGGAGTCCAGTCTTCATCTTGTGTTGAGACT 105361
>seq1039
Length=395486
Score = 89.7 bits (98), Expect = 2e-12
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || |||||| | || ||| | ||
Sbjct 351830 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTTAAGGTCGAACCCTCG 351889
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
||| || ||| | | || || || || || ||| |||||||||||||||| ||
Sbjct 351890 GATGCAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGAAAGGAATTCCTCCTGACCAG 351949
Query 391170 CAACGTTTAATTTTCTCAGGGAAAC-AACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| | | || || |||| || | |||| ||||||||| | | |||| | || || ||
Sbjct 351950 CAAAGACTGATCTTTGCAGGCAAGCAAACTGGAAGATGGACGTATTTTGTCTGACTACAA 352009
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
|| | ||||| | | ||||| | || || |||||
Sbjct 352010 CGTTCAAAAGGAGTCCGCTCTTCATCTTGTGTTGAGACT 352048
>seq362
Length=596293
Score = 87.8 bits (96), Expect = 7e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
|| ||||| ||||| || || || |||| ||||||| ||||| | |||||||||||
Sbjct 227690 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 227749
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467
||||| |||||||| || ||||| |||| |||||| ||||
Sbjct 227750 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 227790
>seq5560
Length=149305
Score = 86.0 bits (94), Expect = 2e-11
Identities = 151/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | || || ||||| || | || ||||| || |||||| | ||
Sbjct 93195 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGGCATCACTCTCGAGGTTGAACCCTCG 93254
Query 391110 GATAACATTGAAGCTATTAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| || ||| |||| || | || || |||||||||||||||||||| ||
Sbjct 93255 GATGCAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 93314
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 93315 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 93374
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | ||| | |||||
Sbjct 93375 CATTCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACT 93413
>seq1203
Length=368362
Score = 84.2 bits (92), Expect = 9e-11
Identities = 169/246 (69%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106
|| ||| | |||||||||||| || || || ||||| ||| || | || | || |
Sbjct 6473 TGTAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAAGAAATG 6530
Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166
|||||||| |||||| || |||| || || ||| | | ||| |||||| | |
Sbjct 6531 GATAAAAGAACTTTAGAAAGAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 6590
Query 96167 CAAATTGCA-CCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225
||||| ||| || || | ||||||||||||||||||| ||| ||||| || ||
Sbjct 6591 CAAAT-GCAGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTT 6649
Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTC 96285
||| || | | || |||||| ||||||| |||| || |||||| || || |
Sbjct 6650 AGGTGGTCTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCGCCTTG 6709
Query 96286 ATAGGG 96291
||| ||
Sbjct 6710 ATATGG 6715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974270369435924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |