Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq16349 93.3 5e-14 seq13180 93.3 5e-14 seq13018 93.3 5e-14 seq215 93.3 5e-14 seq178 93.3 5e-14 seq151 93.3 5e-14 seq7076 91.5 2e-13 seq3032 89.7 6e-13 seq27717 84.2 3e-11 >seq16349 Length=41817 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 36172 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 36114 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||| Sbjct 37871 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCGAGGTCGCGGGTTCGACCCCCGT 37929 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||| Sbjct 26537 TAGCTCAGTTGGTTAGAGGGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCCGT 26595 >seq13180 Length=61179 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 49606 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 49548 >seq13018 Length=62299 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 31581 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 31523 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||| Sbjct 59915 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGCGGGTTCGATCCCCGT 59973 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| Sbjct 49233 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTTGCGGGTTTGAGCCC 49178 >seq215 Length=702973 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 511939 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 511997 >seq178 Length=743899 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 630646 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 630704 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 680589 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 680531 >seq151 Length=797873 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 511539 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 511481 >seq7076 Length=122421 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 158462 CTCTACCCCCAGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACT 158521 |||| || | || || |||||| | || || || ||||| || ||||||| || |||| Sbjct 32272 CTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACT 32331 Query 158522 GTATCAACGTTGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTC 158581 || | || || || || ||||| ||| ||||||| ||| | || || || | Sbjct 32332 TCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTAC 32391 Query 158582 TCTTCAATCATGG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGC 158638 | || ||| ||| ||| ||| ||||| || || ||||||||||| || || |||| Sbjct 32392 TGTTTAATTTTGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCCCAGC 32448 Query 158639 TTGTTCTAGAAC-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACG 158697 | || |||| | | | || ||| || |||||| || | | | || || || Sbjct 32449 TCATTTGTGAACGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACT 32507 Query 158698 GAGAGGGGTTCGGGTGGATTTGGTTCTACTGGCAAT 158733 || |||||||| || || |||||||| ||||| ||| Sbjct 32508 GAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAAT 32543 >seq3032 Length=226399 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||| Sbjct 200034 TAGCTCAGTTGGTTAGAGCGTGGTGCTGATAACGCCGAGGTCGCGGGTTCGATCCCCGT 199976 >seq27717 Length=6327 Score = 84.2 bits (92), Expect = 3e-11 Identities = 180/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 158473 GGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGTT 158532 || || |||||| | || || || ||||| || ||||||| || |||| || | || Sbjct 4141 GGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCATAGATGTA 4200 Query 158533 GGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCAT 158592 || || || ||| | ||| ||||||| ||| | || || || || || ||| | Sbjct 4201 GGAGCTGGTGTCGTAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTT 4260 Query 158593 GG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649 || ||| ||| ||||| || || ||||||||||| || || ||||| || ||| Sbjct 4261 GGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCCCAGCTCATTTGTGAA 4317 Query 158650 C-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACGGAGAGGGGTTC 158708 | | | | || ||| || |||||| || | | | || || || || |||||||| Sbjct 4318 CGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACTGAAAGGGGTTC 4376 Query 158709 GGGTGGATTTGGTTCTACTGGCAAT 158733 || || |||||||| ||||| ||| Sbjct 4377 AGGAGGTTTTGGTTCCACTGGAAAT 4401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588554860073400