Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq16349 93.3 5e-14
seq13180 93.3 5e-14
seq13018 93.3 5e-14
seq215 93.3 5e-14
seq178 93.3 5e-14
seq151 93.3 5e-14
seq7076 91.5 2e-13
seq3032 89.7 6e-13
seq27717 84.2 3e-11
>seq16349
Length=41817
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 36172 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 36114
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||
Sbjct 37871 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCGAGGTCGCGGGTTCGACCCCCGT 37929
Score = 84.2 bits (92), Expect = 3e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||
Sbjct 26537 TAGCTCAGTTGGTTAGAGGGTGGTGCTAATAACGCCAAGGTCGTGGGTTCGATCCCCGT 26595
>seq13180
Length=61179
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 49606 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 49548
>seq13018
Length=62299
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 31581 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 31523
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||
Sbjct 59915 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGCGGGTTCGATCCCCGT 59973
Score = 84.2 bits (92), Expect = 3e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772
||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct 49233 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTTGCGGGTTTGAGCCC 49178
>seq215
Length=702973
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 511939 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 511997
>seq178
Length=743899
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 630646 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 630704
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 680589 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 680531
>seq151
Length=797873
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 511539 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 511481
>seq7076
Length=122421
Score = 91.5 bits (100), Expect = 2e-13
Identities = 188/276 (68%), Gaps = 8/276 (3%)
Strand=Plus/Plus
Query 158462 CTCTACCCCCAGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACT 158521
|||| || | || || |||||| | || || || ||||| || ||||||| || ||||
Sbjct 32272 CTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACT 32331
Query 158522 GTATCAACGTTGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTC 158581
|| | || || || || ||||| ||| ||||||| ||| | || || || |
Sbjct 32332 TCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTAC 32391
Query 158582 TCTTCAATCATGG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGC 158638
| || ||| ||| ||| ||| ||||| || || ||||||||||| || || ||||
Sbjct 32392 TGTTTAATTTTGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCCCAGC 32448
Query 158639 TTGTTCTAGAAC-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACG 158697
| || |||| | | | || ||| || |||||| || | | | || || ||
Sbjct 32449 TCATTTGTGAACGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACT 32507
Query 158698 GAGAGGGGTTCGGGTGGATTTGGTTCTACTGGCAAT 158733
|| |||||||| || || |||||||| ||||| |||
Sbjct 32508 GAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAAT 32543
>seq3032
Length=226399
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||
Sbjct 200034 TAGCTCAGTTGGTTAGAGCGTGGTGCTGATAACGCCGAGGTCGCGGGTTCGATCCCCGT 199976
>seq27717
Length=6327
Score = 84.2 bits (92), Expect = 3e-11
Identities = 180/265 (68%), Gaps = 8/265 (3%)
Strand=Plus/Plus
Query 158473 GGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGTT 158532
|| || |||||| | || || || ||||| || ||||||| || |||| || | ||
Sbjct 4141 GGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCATAGATGTA 4200
Query 158533 GGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCAT 158592
|| || || ||| | ||| ||||||| ||| | || || || || || ||| |
Sbjct 4201 GGAGCTGGTGTCGTAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTT 4260
Query 158593 GG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAA 158649
|| ||| ||| ||||| || || ||||||||||| || || ||||| || |||
Sbjct 4261 GGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCCCAGCTCATTTGTGAA 4317
Query 158650 C-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACGGAGAGGGGTTC 158708
| | | | || ||| || |||||| || | | | || || || || ||||||||
Sbjct 4318 CGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACTGAAAGGGGTTC 4376
Query 158709 GGGTGGATTTGGTTCTACTGGCAAT 158733
|| || |||||||| ||||| |||
Sbjct 4377 AGGAGGTTTTGGTTCCACTGGAAAT 4401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588554860073400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |