Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_015323.1 Length=45667 Score E Sequences producing significant alignments: (Bits) Value seq7076 80.6 8e-11 >seq7076 Length=122421 Score = 80.6 bits (88), Expect = 8e-11 Identities = 128/182 (70%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 985 TATGGGAGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGTGGGGGCG 1044 ||||||||| | ||||| || || || ||||||||||| ||| |||||||| || || Sbjct 32289 TATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCATAGATGTAGGAGCT 32348 Query 1045 GGTGTGATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCT--TGTTCAATTTTTCGC 1102 ||||| ||||||| |||||| | | ||| || |||| | | |||| |||||| Sbjct 32349 GGTGTCATAGATGAAGATTATAGAG--GAAATGTTGGTGTTGTACTGTTTAATTTTGGCA 32406 Query 1103 AACATGCGTTCAACGTTCGGAAGGGAGACCGTATCGCTCAGCTCGTTGTTGAGCGAATCT 1162 || | ||| | || ||||| || || || || |||||| || ||| || || | Sbjct 32407 AAGAAAAGTTTGAAGTCAAAAAGGGTGATCGAATTGCCCAGCTCATTTGTGAACGGATAT 32466 Query 1163 TT 1164 || Sbjct 32467 TT 32468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145913615603894