Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq8026 102 1e-16 >seq8026 Length=109359 Score = 102 bits (112), Expect = 1e-16 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCT 197478 ||||| |||||| || | || |||| || || || ||||| || || || || | Sbjct 37454 ACAGAAATTGAGCACATCGCCTGGAGTGGTCCCCAAGAAGCTTTGGCTTTAGCGGATGCA 37513 Query 197479 AAAG---ACGTTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACC 197535 | || | ||| | | || || |||||||||||||| || | ||||| | ||| Sbjct 37514 AGAGGAAAGATTATCTTTATAGACAAAAGCTACCAGGGGCGAATAAACATCACCCA---G 37570 Query 197536 AACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAA 197595 ||| |||| |||| || | || ||||| |||| ||||| || || || || ||||| Sbjct 37571 AACAACTCCTTGTCTATCAACAAGCTGACTCTGAAAGATGCAGGATCCTACAAAGCCCAG 37630 Query 197596 ATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGTCT 197646 || ||| |||| ||||| |||||||||| | ||| |||| || |||||| Sbjct 37631 ATAAACCAAAAGAATTCTGAAGTCACCACAAGTGAGAAATTCACCCTGTCT 37681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701686708675920