Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_016447.1
Length=219474
Score E
Sequences producing significant alignments: (Bits) Value
seq8026 102 1e-16
>seq8026
Length=109359
Score = 102 bits (112), Expect = 1e-16
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCT 197478
||||| |||||| || | || |||| || || || ||||| || || || || |
Sbjct 37454 ACAGAAATTGAGCACATCGCCTGGAGTGGTCCCCAAGAAGCTTTGGCTTTAGCGGATGCA 37513
Query 197479 AAAG---ACGTTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACC 197535
| || | ||| | | || || |||||||||||||| || | ||||| | |||
Sbjct 37514 AGAGGAAAGATTATCTTTATAGACAAAAGCTACCAGGGGCGAATAAACATCACCCA---G 37570
Query 197536 AACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAA 197595
||| |||| |||| || | || ||||| |||| ||||| || || || || |||||
Sbjct 37571 AACAACTCCTTGTCTATCAACAAGCTGACTCTGAAAGATGCAGGATCCTACAAAGCCCAG 37630
Query 197596 ATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGTCT 197646
|| ||| |||| ||||| |||||||||| | ||| |||| || ||||||
Sbjct 37631 ATAAACCAAAAGAATTCTGAAGTCACCACAAGTGAGAAATTCACCCTGTCT 37681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 701686708675920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |