Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq41499 82.4 9e-11
seq1525 82.4 9e-11
>seq41499
Length=968
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502
|||||||||||||||||||| || ||| || || |||||||| |||||||||||||||
Sbjct 825 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 884
Query 65503 CGAGTTGGGGACTAT 65517
|||| || || |||
Sbjct 885 AGAGTAGGCGAGTAT 899
>seq1525
Length=329219
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502
|||||||||||||||||||| || ||| || || |||||||| |||||||||||||||
Sbjct 305087 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 305146
Query 65503 CGAGTTGGGGACTAT 65517
|||| || || |||
Sbjct 305147 AGAGTAGGCGAGTAT 305161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596143030364640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |