Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq41499 82.4 9e-11 seq1525 82.4 9e-11 >seq41499 Length=968 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 |||||||||||||||||||| || ||| || || |||||||| ||||||||||||||| Sbjct 825 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 884 Query 65503 CGAGTTGGGGACTAT 65517 |||| || || ||| Sbjct 885 AGAGTAGGCGAGTAT 899 >seq1525 Length=329219 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 65443 AATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAG 65502 |||||||||||||||||||| || ||| || || |||||||| ||||||||||||||| Sbjct 305087 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAG 305146 Query 65503 CGAGTTGGGGACTAT 65517 |||| || || ||| Sbjct 305147 AGAGTAGGCGAGTAT 305161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596143030364640