Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq6983 93.3 8e-14
seq1014 86.0 1e-11
>seq6983
Length=123737
Score = 93.3 bits (102), Expect = 8e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || ||||| || | ||| || || | |||||| |||||||||||
Sbjct 100640 ATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGGAGGGATTCCTTCTTT 100699
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| |||| |||| || ||||| |||| ||||| | ||||| ||
Sbjct 100700 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGAT 100759
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || ||||| || || || | || || ||||| ||
Sbjct 100760 GGTCTTCCCTGTCAGGGTCTTCATGAAAATCTGCATCTT 100798
>seq1014
Length=401283
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||||| || ||||| |||| |||| || | |||||| |||||||||||
Sbjct 41490 ATGCCACCTCGCAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCT 41549
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | ||||| || || ||||| | | ||| || |||||
Sbjct 41550 GACAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGT 41609
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || ||||| ||||| | ||| | ||| ||| || || | |||
Sbjct 41610 GGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCG 41669
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||| || || || || || | || || || || || |||||
Sbjct 41670 ACCTCTAGAGTGATGGTCTTGCCCGTCAAGGTCTTCACTAAGATCTGCAT 41719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899011113366960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |