Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq561 122 8e-23
seq17051 120 3e-22
seq10582 118 1e-21
seq6983 113 4e-20
seq1014 107 2e-18
seq393 93.3 4e-14
seq5560 91.5 1e-13
seq25372 89.7 5e-13
seq3805 82.4 7e-11
>seq561
Length=508305
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || ||||| || ||| || |
Sbjct 125670 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTGC 125729
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| |||||||| ||||| |||||||| ||||| || ||
Sbjct 125730 GATACAATAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 125789
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| ||| | | |||| || || |||
Sbjct 125790 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 125849
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| | || || || | |||||| || | || || ||
Sbjct 125850 ATTCAAAAGGAGTTCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 125896
>seq17051
Length=38469
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || ||||| || ||| || |
Sbjct 11247 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 11306
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | |||| ||||| |||||||| ||||| |||||||| |||| ||| |
Sbjct 11307 GATACAATGGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCTCGACCGG 11366
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| ||| | | |||| || || |||
Sbjct 11367 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 11426
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||||||||||| || || || || | |||||| || | || || ||||
Sbjct 11427 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGCG 11475
>seq10582
Length=81843
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || ||||| || ||| || |
Sbjct 38742 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 38683
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| ||| |||| ||||| |||||||| ||||| || ||
Sbjct 38682 GATACAATAGAAAACGTAAAGGCCAAGGTCCAGGACAAGGAAGGAATTCCTCCTGACCAG 38623
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882
||| | |||||||||| || || || ||||| ||| || | || | ||| || || ||
Sbjct 38622 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACAA 38564
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||||| | || || || | |||||| ||
Sbjct 38563 CATTCAAAAGGAGTTCACGCTTCATCTTGTGTTGAGA 38527
>seq6983
Length=123737
Score = 113 bits (124), Expect = 4e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || || || || || || || || || || ||| | || ||| | |
Sbjct 100796 GATGCAGATTTTCATGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTC 100737
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || ||||||||||| ||||| | ||
Sbjct 100736 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATCCCTCCTAACCA 100677
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881
||| | |||||||||| || || || |||||||| | | | || | ||| || || |
Sbjct 100676 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGA-TGGCCATACTTCGTCTGACTACA 100618
Query 24882 ACATTCAAAAGGAATCGAC 24900
||||||||||||| || ||
Sbjct 100617 ACATTCAAAAGGAGTCCAC 100599
>seq1014
Length=401283
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || | || || || || || || || || || || |||
Sbjct 41720 GATGCAGATCTTAGTGAAGACCTTGACGGGCAAGACCATCACTCTAGAGGTCGAGCCCAG 41661
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || || || || || || ||
Sbjct 41660 TGACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 41601
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| || || || ||||||||||||||| | | ||||||| |||||
Sbjct 41600 GCAGCGTCTGATTTTCGCGGGCAAACAGCTGGAGGATGGCCGCACTCTGTCAGACTATAA 41541
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||||||||| | || |||| || |||
Sbjct 41540 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGTCTGCGAGGTGGC 41492
>seq393
Length=578971
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 169107 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 169048
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 169047 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 168988
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || ||||||||||| ||| | | | || ||||| |||
Sbjct 168987 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 168928
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || ||||| || ||| ||||
Sbjct 168927 ATCCAGAAAGATTCGACCCTGCACCTGGT 168899
>seq5560
Length=149305
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || | || || ||||| || ||| || |
Sbjct 93195 ATGCAGATTTTCTTGAAGACCCTGACAGGGATGGGCATCACTCTCGAGGTTGAACCCTCG 93254
Query 24764 GACACAGTAGAAACG-GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || |||||| ||||| |||| ||| ||||| |||||||| ||||| || ||
Sbjct 93255 GATGCAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 93314
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 93315 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 93374
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
|||||||||||| || || || || ||||
Sbjct 93375 CATTCAAAAGGAGTCTACTCTTCATCTTG 93403
>seq25372
Length=10183
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || | || || || || || || || || || || ||| || |
Sbjct 9067 GATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTGGAGGTCGAACCCTC 9126
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| ||||| ||||| ||||||||||| || || | ||| ||| | | ||
Sbjct 9127 GGATACAACAGAAAATGTAAACGCCAAGATCCAAGATAAGGATGTAATTCCTTCTAACCA 9186
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||| ||||| || || || ||||| ||| | | |||| || || ||
Sbjct 9187 GCAAAGATTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 9246
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|| ||||||||| || || || || | ||||| ||
Sbjct 9247 CAGTCAAAAGGAGTCCACTCTTCATCTTCTGTTGAGA 9283
>seq3805
Length=195799
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| || || || || ||| | || || || || | || || ||| |||
Sbjct 70796 ATGCAGATCTTCATGAAGACCCTGACCTGCAAGACCATCACCCCGGAGGTGGAACCCAGT 70855
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||| || |||||||| || || || || ||
Sbjct 70856 GACACCG-AGAA--TGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAG 70912
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||||| || |||||| |||| ||| | | | || ||||| |||
Sbjct 70913 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCTGCACTCTTTCTGATTACAAC 70972
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || ||||| || ||| ||||
Sbjct 70973 ATCCAGAAAGAGTCGACCCTGCACCTGGT 71001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449575906344840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |