Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq18093 86.0 5e-12 seq393 86.0 5e-12 >seq18093 Length=33488 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || || || || || || || ||||| ||||| ||| | || |||||| Sbjct 3029 AAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 2970 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| || ||||||||| | ||| || Sbjct 2969 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGAC 2910 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| || ||||||||||| |||| | || | | |||||| Sbjct 2909 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTAC 2850 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| ||||| ||||| |||| | | ||| |||| || Sbjct 2849 AACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTGAGAGGTGG 2800 >seq393 Length=578971 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || ||||| || || | |||||||| ||||| ||| | || |||||| Sbjct 169110 AAAATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 169051 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| || || |||||| | ||| || Sbjct 169050 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGAC 168991 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| || ||||||||||| |||| | | || | | |||||| Sbjct 168990 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 168931 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || ||||| || || ||||| |||| Sbjct 168930 AACATCCAGAAAGATTCGACCCTGCACCTGGT 168899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412553782705079