Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq18093 86.0 5e-12
seq393 86.0 5e-12
>seq18093
Length=33488
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|||||||| || || || || || || || ||||| ||||| ||| | || ||||||
Sbjct 3029 AAAATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 2970
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || ||| | || || ||||| || ||||||||| | ||| ||
Sbjct 2969 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGAC 2910
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || || || | ||| || ||||||||||| |||| | || | | ||||||
Sbjct 2909 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTAC 2850
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || ||||| ||||| ||||| |||| | | ||| |||| ||
Sbjct 2849 AACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTGAGAGGTGG 2800
>seq393
Length=578971
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|||||||| || ||||| || || | |||||||| ||||| ||| | || ||||||
Sbjct 169110 AAAATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 169051
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || ||| | || || ||||| || || |||||| | ||| ||
Sbjct 169050 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGAC 168991
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || || || | ||| || ||||||||||| |||| | | || | | ||||||
Sbjct 168990 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 168931
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||| || ||||| || || ||||| ||||
Sbjct 168930 AACATCCAGAAAGATTCGACCCTGCACCTGGT 168899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412553782705079
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |