Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1014 132 3e-26
seq561 113 3e-20
seq17051 109 4e-19
seq10582 109 4e-19
seq393 105 4e-18
seq18093 89.7 3e-13
seq3456 86.0 4e-12
seq2861 86.0 4e-12
>seq1014
Length=401283
Score = 132 bits (146), Expect = 3e-26
Identities = 159/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| ||||| || |||||||| || || |||| ||||
Sbjct 41508 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTGCGGCCATCC 41567
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || ||||| ||||| || |||||||| | || | |||||||||||
Sbjct 41568 TCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 41627
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || || | ||| ||| |||||| || | || ||||
Sbjct 41628 TGGATTTTAGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACCTCTAGAGTGATGG 41685
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||||| | |||||| || |||||||||||
Sbjct 41686 TCTTGCCCGTCAAGGTCTTCACTAAGATCTGCAT 41719
>seq561
Length=508305
Score = 113 bits (124), Expect = 3e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| ||| |||||| |||||||| ||||| || | | || ||
Sbjct 125884 CTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 125825
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| ||||||||| | || | || ||||||
Sbjct 125824 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 125765
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || ||| | |||| | || || ||||| || | || |||
Sbjct 125764 TCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACCTCGAGAGTGATG 125705
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || |||||||| || || ||||||||
Sbjct 125704 GTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 125670
>seq17051
Length=38469
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| ||| |||||| |||||||| ||||| || | | || ||
Sbjct 11461 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 11402
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| |||| |||| | || | || ||||||
Sbjct 11401 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGAATTCCTTCCTTG 11342
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || ||| | | || | || || ||||| || | || |||
Sbjct 11341 TCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACCTCGAGAGTGATG 11282
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| |||||||| || || ||||||||
Sbjct 11281 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 11247
>seq10582
Length=81843
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| ||| |||||| |||||||| ||||| || | | | ||
Sbjct 38528 CTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCA 38587
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| ||||||||| | || | || ||||||
Sbjct 38588 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 38647
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | | || || ||| | |||| | || || ||||| || | || |||
Sbjct 38648 TCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATG 38707
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| |||||||| || || ||||||||
Sbjct 38708 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 38742
>seq393
Length=578971
Score = 105 bits (116), Expect = 4e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||||||||||| | ||| || ||||| ||||| || || ||
Sbjct 168881 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAA 168940
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| || || || || ||||| || | |||||||| | ||
Sbjct 168941 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 169000
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || ||||| || | || || || || || || || | ||| ||| ||| |
Sbjct 169001 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 169058
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 169059 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 169107
>seq18093
Length=33488
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||| ||||| ||||| || || || || || | ||||
Sbjct 2815 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 2874
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || || ||||| || | |||||||| | || | || || || ||
Sbjct 2875 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 2934
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| ||| ||| || || | ||| ||||||
Sbjct 2935 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2994
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| || |||||||||||
Sbjct 2995 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 3026
>seq3456
Length=207676
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||||||||||| | || | | ||||| |||| || || ||
Sbjct 50546 CCACCCCTCAGACGGAGGACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAA 50605
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| ||| |||| ||||| || || || || ||||| || | |||||| | | ||
Sbjct 50606 AGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGG 50665
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || ||||| || | || || || ||| | || | ||| ||| ||| ||
Sbjct 50666 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACC 50725
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || |||||||||||
Sbjct 50726 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 50772
>seq2861
Length=233481
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| ||||| ||||| | ||| || || | | ||||
Sbjct 226395 AGCACCAAGTGTAGGGTGGACTCTTTCTGGATGTTGTTGTCTGAGAG--TTCTACCATCT 226338
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||| || || || || ||||| | |||||||| || | |||||||||||
Sbjct 226337 TCCCACTGTTTGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGGTGCCCTCCTTGTCT 226278
Query 34886 TTTATTTTTTGTTTGACGGATGC--TATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || | ||| | ||| ||| ||| || |||| ||| |||
Sbjct 226277 TGGATTTTGGCTTTGAC--ATTCTTTATGGCGTCACTGGGCTCCACCTCAAGGGTGGTGG 226220
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || |||||||| ||| ||||||||||
Sbjct 226219 TCTTGCCTGTCAGGGTCTTCACACAGATCTGCAT 226186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325465739498657
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |