Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1014 132 3e-26 seq561 113 3e-20 seq17051 109 4e-19 seq10582 109 4e-19 seq393 105 4e-18 seq18093 89.7 3e-13 seq3456 86.0 4e-12 seq2861 86.0 4e-12 >seq1014 Length=401283 Score = 132 bits (146), Expect = 3e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| || |||||||| || || |||| |||| Sbjct 41508 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTGCGGCCATCC 41567 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 41568 TCCAGCTGTTTGCCCGCGAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 41627 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| |||||| || | || |||| Sbjct 41628 TGGATTTTAGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACCTCTAGAGTGATGG 41685 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| | |||||| || ||||||||||| Sbjct 41686 TCTTGCCCGTCAAGGTCTTCACTAAGATCTGCAT 41719 >seq561 Length=508305 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | || || Sbjct 125884 CTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 125825 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| ||||||||| | || | || |||||| Sbjct 125824 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 125765 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || ||| | |||| | || || ||||| || | || ||| Sbjct 125764 TCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACCTCGAGAGTGATG 125705 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || |||||||| || || |||||||| Sbjct 125704 GTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 125670 >seq17051 Length=38469 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | || || Sbjct 11461 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 11402 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| |||| |||| | || | || |||||| Sbjct 11401 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGAATTCCTTCCTTG 11342 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || ||| | | || | || || ||||| || | || ||| Sbjct 11341 TCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACCTCGAGAGTGATG 11282 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| || || |||||||| Sbjct 11281 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 11247 >seq10582 Length=81843 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | | || Sbjct 38528 CTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCA 38587 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| ||||||||| | || | || |||||| Sbjct 38588 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 38647 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | | || || ||| | |||| | || || ||||| || | || ||| Sbjct 38648 TCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATG 38707 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| || || |||||||| Sbjct 38708 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 38742 >seq393 Length=578971 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| || ||||| ||||| || || || Sbjct 168881 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAA 168940 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || || ||||| || | |||||||| | || Sbjct 168941 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 169000 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || ||||| || | || || || || || || || | ||| ||| ||| | Sbjct 169001 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 169058 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| |||||||||||||| Sbjct 169059 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 169107 >seq18093 Length=33488 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| || || || || || | |||| Sbjct 2815 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 2874 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || ||||| || | |||||||| | || | || || || || Sbjct 2875 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 2934 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 2935 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 2994 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 2995 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 3026 >seq3456 Length=207676 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | || | | ||||| |||| || || || Sbjct 50546 CCACCCCTCAGACGGAGGACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAA 50605 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || ||| |||| ||||| || || || || ||||| || | |||||| | | || Sbjct 50606 AGAGTGCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGG 50665 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || || ||| | || | ||| ||| ||| || Sbjct 50666 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACC 50725 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 50726 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 50772 >seq2861 Length=233481 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| | ||| || || | | |||| Sbjct 226395 AGCACCAAGTGTAGGGTGGACTCTTTCTGGATGTTGTTGTCTGAGAG--TTCTACCATCT 226338 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||| || || || || ||||| | |||||||| || | ||||||||||| Sbjct 226337 TCCCACTGTTTGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGGTGCCCTCCTTGTCT 226278 Query 34886 TTTATTTTTTGTTTGACGGATGC--TATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || | ||| | ||| ||| ||| || |||| ||| ||| Sbjct 226277 TGGATTTTGGCTTTGAC--ATTCTTTATGGCGTCACTGGGCTCCACCTCAAGGGTGGTGG 226220 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| ||| |||||||||| Sbjct 226219 TCTTGCCTGTCAGGGTCTTCACACAGATCTGCAT 226186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325465739498657