Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq16347 113 1e-21
seq1823 113 1e-21
seq4199 107 6e-20
seq151 102 3e-18
seq6549 100 9e-18
seq8255 98.7 3e-17
seq2421 98.7 3e-17
seq1787 98.7 3e-17
seq21 98.7 3e-17
seq6176 84.2 7e-13
seq3909 78.8 3e-11
>seq16347
Length=41843
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 36067 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 36126
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 36127 CCGGGTTTCAGC 36138
>seq1823
Length=301725
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 241252 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 241311
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 241312 CCGGGTTTCAGC 241323
>seq4199
Length=183833
Score = 107 bits (118), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 108009 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 108068
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 108069 CCGGGTTTCAGC 108080
>seq151
Length=797873
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 527279 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 527220
Query 2827 CCCCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 527219 TCCCGGCTTTCGGC 527206
>seq6549
Length=130944
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 103249 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 103190
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 103189 CCCGGGTTTCGGC 103177
Score = 98.7 bits (108), Expect = 3e-17
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||||| |
Sbjct 48654 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCTCTGGTTCGA 48595
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 48594 TCCCGGGTTTCGGC 48581
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 76390 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 76449
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 76450 CCGGGTTTCGGC 76461
Score = 86.0 bits (94), Expect = 2e-13
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| |||||||| |||||||||||||||||| |||||||||||| |
Sbjct 82697 GCCGAAATAGCTCAGCTGGGAGAGTGTTAGACTGAAGATCTAAAAGTCCCTGGTTCACTC 82638
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 82637 CCGGGTTTCGGC 82626
>seq8255
Length=106613
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 18108 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 18167
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 18168 CCGGGTTTCGGC 18179
>seq2421
Length=259196
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 161544 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 161603
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 161604 CCGGGTTTCGGC 161615
>seq1787
Length=304325
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 60952 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 60893
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 60892 CCGGGTTTCGGC 60881
>seq21
Length=1437949
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 85066 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 85125
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 85126 CCGGGTTTCGGC 85137
>seq6176
Length=137598
Score = 84.2 bits (92), Expect = 7e-13
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||||||||||| |||||||||||| |||||||||| |||||||| | |||
Sbjct 81580 GAAATAGCTCAGTTGGGAGACCATTAGACTGAAAATCTAAAGGTTCCTGGTTCGATCCCA 81639
Query 2832 GGCTTCAGC 2840
|| ||| ||
Sbjct 81640 GGTTTCGGC 81648
Score = 78.8 bits (86), Expect = 3e-11
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 2785 TGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840
||||||||| |||||||||||||||||||||||||||||| | |||||| ||| ||
Sbjct 87055 TGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTTTCGGC 87110
>seq3909
Length=192770
Score = 78.8 bits (86), Expect = 3e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| | |
Sbjct 59158 GCTGAAATAGCTTGGTTGTGAGAGCCTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATC 59099
Query 2829 CCGGGCTT 2836
| ||| ||
Sbjct 59098 CTGGGTTT 59091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15839683573935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |