Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq7377 109 8e-19 >seq7377 Length=118119 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| |||| || || | || ||||| || ||||| || | | || | ||| | | Sbjct 31942 AGATAATTGGTGGCGAGATGTATCCTCCCACAGTCAAAGATACTCAGGTCGAGATGATCT 31883 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||||| ||| | | || || || |||| | || | ||||| || | Sbjct 31882 ACCCCCCTCATGTTCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAAGTCTTTGGTCTAG 31823 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| ||||||||| || |||||| | || || ||||| || || || | Sbjct 31822 TGCCTGGTCTGATGATGTACGCCACAATTTGGCTGCGGGAACATAACAGAGTGTGTGATG 31763 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| ||||| ||||| || |||||| |||| || ||||||||||||| Sbjct 31762 TGCTTAAACATGAGCATCCAGAATGGGACGATGAGCAGCTGTTCCAGA 31715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722823584202720