Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq6451 123 3e-23
seq16711 93.3 6e-14
>seq6451
Length=132943
Score = 123 bits (136), Expect = 3e-23
Identities = 194/274 (71%), Gaps = 8/274 (3%)
Strand=Plus/Minus
Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336
||||| |||||||| |||||| | || |||||||| | ||||| || || | |||
Sbjct 90822 GACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGA-AGTCCC 90764
Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392
||| || | || | | | || ||||||||| || |||||| || | | |||
Sbjct 90763 AGGG---TCACTGTCCTTAAGCCATAAGTACGACATGTCCGACATGCACGCGATTGCCAG 90707
Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452
||| ||||||||||| |||| || || || || || || |||| |||||||| ||
Sbjct 90706 GTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCCCCCTACCCGCCGTG 90647
Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512
| |||| ||||||| | | || | || | ||||| | || ||| |||| ||| ||
Sbjct 90646 CAGCGGCGTCCACGTGCGCTCCGTGTGTGTTTTCGGAGCGGGTGACTTGAACTGGATGTT 90587
Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546
| |||| | ||| ||||||||||||||||||||
Sbjct 90586 GCGCGTGCACCACTTGTTCGCCAACAAGTTCGAC 90553
>seq16711
Length=40113
Score = 93.3 bits (102), Expect = 6e-14
Identities = 179/264 (68%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| |||||| |||||| | || || |||||||||||||| | ||| |||| | |||
Sbjct 5143 CCACTGAGCAGAGAAGAGTTAGACTTCCCCATCGCCTACTCTGTGGTGGTCCATGAGAAG 5084
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
|| || | ||||| || || ||| | || | || ||||| |||||| | |||||||||
Sbjct 5083 ATTGAAAACTTCGAACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTC 5024
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850
|| ||||| |||||| || |||| || ||| ||||||| |||
Sbjct 5023 CATGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAAGGCCATCATTTCCTGC 4964
Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910
||||| || || | ||||| | || | ||||| |||| ||||||| |
Sbjct 4963 TTCCCAAATGTCTTCATGGCCAGTAAGTTGGTCCGGGTGGTTTACGCCTCCTGGTCCAGG 4904
Query 13911 GTGCAGGCCGACCTCAGCTGCATG 13934
|||||||| ||||| | ||| |||
Sbjct 4903 GTGCAGGCTGACCTGAACTGTATG 4880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658268176769280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |