Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq393 132 1e-25 seq18093 127 5e-24 seq2543 125 2e-23 seq3456 123 6e-23 seq17051 105 2e-17 seq561 105 2e-17 seq10582 102 2e-16 seq3805 100 7e-16 seq1039 100 7e-16 seq5560 96.9 8e-15 seq3119 91.5 3e-13 seq204 91.5 3e-13 seq2392 84.2 5e-11 >seq393 Length=578971 Score = 132 bits (146), Expect = 1e-25 Identities = 167/228 (73%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || || ||||| |||||||||||||| | | ||| Sbjct 168886 CCTCAGACGGAGGACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAAAGAGT 168945 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| || Sbjct 168946 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 169005 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || ||| |||| | | |||| ||| ||| || || Sbjct 169006 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 169062 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || |||||||| |||| ||||||||| Sbjct 169063 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 169110 >seq18093 Length=33488 Score = 127 bits (140), Expect = 5e-24 Identities = 165/227 (73%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | |||||| || || || ||||||||||| |||||||||||||| | | ||| Sbjct 2806 CTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 2865 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||| || || ||||| |||||||||||||| | | ||| ||| Sbjct 2866 TGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCT 2925 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || || || || || || || |||| | | |||| ||| ||| || || Sbjct 2926 TCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 2982 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || | ||||||||||||| ||||||||| Sbjct 2983 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATTTT 3029 >seq2543 Length=251032 Score = 125 bits (138), Expect = 2e-23 Identities = 163/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || ||||||||||| |||||||||||||| | | ||| Sbjct 121588 CCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 121647 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || ||||| || ||| || || ||||| ||||||||||||| || | ||| || Sbjct 121648 GCAGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGT-CGGGGGGATGCC 121706 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || ||| ||| | | |||| ||| ||| || || Sbjct 121707 TTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTC---ACTGGGCTCCACCTC 121763 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102 || || || || |||||||| || |||||| |||||| |||| Sbjct 121764 CAGCGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGC 121806 >seq3456 Length=207676 Score = 123 bits (136), Expect = 6e-23 Identities = 163/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || ||| |||| ||||||| |||||| | | ||| Sbjct 50551 CCTCAGACGGAGGACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAAAGAGT 50610 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || |||||||||||||||||| | | | ||| || Sbjct 50611 GCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGGATGCC 50670 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCA 152060 |||||| || || || || || || |||| | | ||| ||| | ||| || || Sbjct 50671 TTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGA--CTCCACCTCC 50728 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || ||||||||||||| |||||| Sbjct 50729 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 50772 >seq17051 Length=38469 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 11464 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 11405 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || ||| |||| | ||||||||| Sbjct 11404 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGAATTCCTTCC 11345 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || || | || | | || || || || || ||||| Sbjct 11344 TTGTCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACCTCGAGAGTG 11285 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 11284 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 11244 >seq561 Length=508305 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| |||| ||||| |||||||| || | ||||| | Sbjct 125887 AGTCTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 125828 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | | ||||||||| Sbjct 125827 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 125768 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || || | |||| | || | || || || ||||| Sbjct 125767 TTGTCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACCTCGAGAGTG 125708 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || ||||||||||| | |||||| || Sbjct 125707 ATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATATT 125667 >seq10582 Length=81843 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | ||||||||||| || |||| ||||| |||||||| || | ||||| Sbjct 38525 AGTCTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 38584 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | | ||||||||| Sbjct 38585 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 38644 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || | || || || | |||| | || || || || || ||||| Sbjct 38645 TTGTCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 38704 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 38705 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 38745 >seq3805 Length=195799 Score = 100 bits (110), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | |||||| || || || || |||||||| |||||||||||||| | | ||| Sbjct 71013 CTCAGACAGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 70954 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| | ||| || || |||| |||||||||||||| | | ||| ||| Sbjct 70953 CAGCCATCTTCCATCTGTTTGCCTGCAAAGAGGAGCCTCTGCTGGTCAGGGGGGATGCCT 70894 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || || || || || || ||| ||| || |||| ||| || || || Sbjct 70893 TCTTTATCCTGGATCTTGGCCTTCACATTCT---CGGTGTC---ACTGGGTTCCACCTCC 70840 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 | || || || |||| || || ||||||| ||||| |||||| | |||| Sbjct 70839 GGGGTGATGGTCTTGCAGGTCAGGGTCTTCATGAAGATCTGCATATCACCC 70789 >seq1039 Length=395486 Score = 100 bits (110), Expect = 7e-16 Identities = 156/222 (70%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | ||||||||||||| ||||| ||||| | |||||| || | ||| | | Sbjct 352048 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGT 351989 Query 151947 CCATCTTCTAGGCT-TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || | || || || ||||| || || |||||||| | | ||||||| Sbjct 351988 CCATCTTCCAGTTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTT 351929 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | |||| || || || || | |||||| Sbjct 351928 CTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTTAAGAGT 351869 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 351868 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 351827 >seq5560 Length=149305 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||||||||| ||||| |||||||| || | ||||| | Sbjct 93413 AGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 93354 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | | ||||||||| Sbjct 93353 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 93294 Query 152007 TTTTCTTG 152014 || || || Sbjct 93293 TTGTCCTG 93286 >seq3119 Length=221544 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/217 (70%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || |||||||| |||||||||| ||| | | ||| |||||| Sbjct 196885 AGGACCTGGTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCT 196826 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | ||| |||||||| || Sbjct 196825 TCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAG-GATGCCTTCCTTATCC 196767 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| || | | |||| ||| |||||| || || || || Sbjct 196766 TGGATCTTGGCCTTCACATTCCTGATGATGTC---ACTGGGCTCTACCTCCAGGGTGATG 196710 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 || |||| || | ||||||||||||| ||||||| Sbjct 196709 GTCTTGCTGGTCAAGGTCTTCACGAAGATTTGCATTT 196673 >seq204 Length=711012 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || |||||||| |||||||||||||| | | ||| Sbjct 457447 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 457388 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| || Sbjct 457387 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 457328 Query 152003 TTC 152005 ||| Sbjct 457327 TTC 457325 >seq2392 Length=260735 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 ||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| || Sbjct 4918 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAGT 4863 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 | || || ||||| || || |||||||| | | ||||||||||| || || || Sbjct 4862 TGCCTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATC 4803 Query 152019 TTTTGTTTGACA-GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077 || || ||| | ||| | ||||| || ||||||||||| || || | || Sbjct 4802 TTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCAT-CC 4744 Query 152078 CGTGAGAGTCTTCACGAAGACCTGCA 152103 | || ||||||| ||| | ||||| Sbjct 4743 CCAGAAGGTCTTCATGAAAATCTGCA 4718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152975149231213