Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq393 132 1e-25
seq18093 127 5e-24
seq2543 125 2e-23
seq3456 123 6e-23
seq17051 105 2e-17
seq561 105 2e-17
seq10582 102 2e-16
seq3805 100 7e-16
seq1039 100 7e-16
seq5560 96.9 8e-15
seq3119 91.5 3e-13
seq204 91.5 3e-13
seq2392 84.2 5e-11
>seq393
Length=578971
Score = 132 bits (146), Expect = 1e-25
Identities = 167/228 (73%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || || || ||||| |||||||||||||| | | |||
Sbjct 168886 CCTCAGACGGAGGACCAGGTGCAGGGTCGAATCTTTCTGGATGTTGTAATCAGAAAGAGT 168945
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || ||||| |||||||||||||| | | ||| ||
Sbjct 168946 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 169005
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 169006 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACCTC 169062
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || || |||||||| |||| |||||||||
Sbjct 169063 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 169110
>seq18093
Length=33488
Score = 127 bits (140), Expect = 5e-24
Identities = 165/227 (73%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || | |||||| || || || ||||||||||| |||||||||||||| | | |||
Sbjct 2806 CTCAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 2865
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|||||||| || ||| || || ||||| |||||||||||||| | | ||| |||
Sbjct 2866 TGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCT 2925
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || || || |||| | | |||| ||| ||| || ||
Sbjct 2926 TCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 2982
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || | ||||||||||||| |||||||||
Sbjct 2983 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATTTT 3029
>seq2543
Length=251032
Score = 125 bits (138), Expect = 2e-23
Identities = 163/223 (73%), Gaps = 7/223 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || ||||||||||| |||||||||||||| | | |||
Sbjct 121588 CCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 121647
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| || ||||| || ||| || || ||||| ||||||||||||| || | ||| ||
Sbjct 121648 GCAGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGT-CGGGGGGATGCC 121706
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|||||| || || || || || ||| ||| | | |||| ||| ||| || ||
Sbjct 121707 TTCCTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTC---ACTGGGCTCCACCTC 121763
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102
|| || || || |||||||| || |||||| |||||| ||||
Sbjct 121764 CAGCGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGC 121806
>seq3456
Length=207676
Score = 123 bits (136), Expect = 6e-23
Identities = 163/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || || ||| |||| ||||||| |||||| | | |||
Sbjct 50551 CCTCAGACGGAGGACCAGGTGCAGTGTTGACCCTTTCTGGATGTCGTAATCAGAAAGAGT 50610
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || |||||||||||||||||| | | | ||| ||
Sbjct 50611 GCAGCCATCTTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGACAGGGGGGATGCC 50670
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCA 152060
|||||| || || || || || || |||| | | ||| ||| | ||| || ||
Sbjct 50671 TTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGA--CTCCACCTCC 50728
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 50729 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 50772
>seq17051
Length=38469
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 11464 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 11405
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || ||| |||| | |||||||||
Sbjct 11404 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCCGGTCGAGAGGAATTCCTTCC 11345
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || || | || | | || || || || || |||||
Sbjct 11344 TTGTCCTGGATCTTGGCCTTTACGTTTTCCATTGTATCCGAGGGTTCGACCTCGAGAGTG 11285
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || ||||||||||| | |||||| ||
Sbjct 11284 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 11244
>seq561
Length=508305
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| |||| ||||| |||||||| || | ||||| |
Sbjct 125887 AGTCTCAACACAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 125828
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | | |||||||||
Sbjct 125827 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 125768
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || || | |||| | || | || || || |||||
Sbjct 125767 TTGTCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCGCAGGGTTCGACCTCGAGAGTG 125708
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || ||||||||||| | |||||| ||
Sbjct 125707 ATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATATT 125667
>seq10582
Length=81843
Score = 102 bits (112), Expect = 2e-16
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||||||||| || |||| ||||| |||||||| || | |||||
Sbjct 38525 AGTCTCAACACAAGATGAAGCGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 38584
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | | |||||||||
Sbjct 38585 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 38644
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || | || || || | |||| | || || || || || |||||
Sbjct 38645 TTGTCCTGGACCTTGGCCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 38704
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || ||||||||||| | |||||| ||
Sbjct 38705 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 38745
>seq3805
Length=195799
Score = 100 bits (110), Expect = 7e-16
Identities = 162/231 (70%), Gaps = 9/231 (4%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || | |||||| || || || || |||||||| |||||||||||||| | | |||
Sbjct 71013 CTCAGACAGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 70954
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| | ||| || || |||| |||||||||||||| | | ||| |||
Sbjct 70953 CAGCCATCTTCCATCTGTTTGCCTGCAAAGAGGAGCCTCTGCTGGTCAGGGGGGATGCCT 70894
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || || ||| ||| || |||| ||| || || ||
Sbjct 70893 TCTTTATCCTGGATCTTGGCCTTCACATTCT---CGGTGTC---ACTGGGTTCCACCTCC 70840
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111
| || || || |||| || || ||||||| ||||| |||||| | ||||
Sbjct 70839 GGGGTGATGGTCTTGCAGGTCAGGGTCTTCATGAAGATCTGCATATCACCC 70789
>seq1039
Length=395486
Score = 100 bits (110), Expect = 7e-16
Identities = 156/222 (70%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||||||||||| ||||| ||||| | |||||| || | ||| | |
Sbjct 352048 AGTCTCAACACAAGATGAAGAGCGGACTCCTTTTGAACGTTGTAGTCAGACAAAATACGT 351989
Query 151947 CCATCTTCTAGGCT-TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || | || || || ||||| || || |||||||| | | |||||||
Sbjct 351988 CCATCTTCCAGTTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTT 351929
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || || ||| | |||| || || || || | ||||||
Sbjct 351928 CTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGCATCCGAGGGTTCGACCTTAAGAGT 351869
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || ||||||||||| | |||||| ||
Sbjct 351868 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 351827
>seq5560
Length=149305
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||||||||| ||||| |||||||| || | ||||| |
Sbjct 93413 AGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 93354
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || |||||||| | | |||||||||
Sbjct 93353 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 93294
Query 152007 TTTTCTTG 152014
|| || ||
Sbjct 93293 TTGTCCTG 93286
>seq3119
Length=221544
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/217 (70%), Gaps = 7/217 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || || || |||||||| |||||||||| ||| | | ||| ||||||
Sbjct 196885 AGGACCTGGTGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCT 196826
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | ||| |||||||| ||
Sbjct 196825 TCCAGATGCTTGCCTGCAAAGATGAGCCTCTGCTGTTCGGGAG-GATGCCTTCCTTATCC 196767
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| || | | |||| ||| |||||| || || || ||
Sbjct 196766 TGGATCTTGGCCTTCACATTCCTGATGATGTC---ACTGGGCTCTACCTCCAGGGTGATG 196710
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
|| |||| || | ||||||||||||| |||||||
Sbjct 196709 GTCTTGCTGGTCAAGGTCTTCACGAAGATTTGCATTT 196673
>seq204
Length=711012
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| || || || || |||||||| |||||||||||||| | | |||
Sbjct 457447 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 457388
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || ||||| |||||||||||||| | | ||| ||
Sbjct 457387 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 457328
Query 152003 TTC 152005
|||
Sbjct 457327 TTC 457325
>seq2392
Length=260735
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958
||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| ||
Sbjct 4918 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACATCCATCTTCCAGT 4863
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
| || || ||||| || || |||||||| | | ||||||||||| || || ||
Sbjct 4862 TGCCTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATC 4803
Query 152019 TTTTGTTTGACA-GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077
|| || ||| | ||| | ||||| || ||||||||||| || || | ||
Sbjct 4802 TTGACCTTTACATTTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCAT-CC 4744
Query 152078 CGTGAGAGTCTTCACGAAGACCTGCA 152103
| || ||||||| ||| | |||||
Sbjct 4743 CCAGAAGGTCTTCATGAAAATCTGCA 4718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1152975149231213
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