Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq130414 87.8 3e-12 >seq130414 Length=94101111 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 70250 ATGGCACTACCACCGTGTCA--CTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGT 70307 ||||| || || ||||| || || |||| | |||| ||| | |||| || ||| Sbjct 42658986 ATGGCCCTGCCTCCGTGCCATGCTCTTTGCC--AGTTCTACGTGGTGAATGGTGAACTGT 42658929 Query 70308 CATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAA 70367 | ||| |||| |||||| | ||||||||||| ||||||||||| ||||| || | Sbjct 42658928 CCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTACCCTTCAACATCGCCA 42658869 Query 70368 GCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413 |||| || || | || ||||||| || ||||| || |||||||| Sbjct 42658868 GCTACTCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAA 42658823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738580125395000