Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq152761 134 1e-26 >seq152761 Length=70119229 Score = 134 bits (148), Expect = 1e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| |||||||| ||||| ||||||||| Sbjct 36280966 GGTTACCTGGGTTGCCAAGCCTTGTCCGAGATGATCCAGTTTTATTTGGAGGAGGTGATG 36281025 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || | | || ||||||||| ||||||| ||||| |||||||||||| Sbjct 36281026 CCCCAGGCTGAGAACGAGGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAG 36281085 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || || || ||||||| ||||| Sbjct 36281086 CTGAAGACCCTCCGGCTGAGACTGCGGCGCTG 36281117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446252534990000