Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq152761 109 5e-19 >seq152761 Length=70119229 Score = 109 bits (120), Expect = 5e-19 Identities = 112/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 36280975 GGTTGCCAAGCCTTGTCCGAGATGATCCAGTTTTATTTGGAGGAGGTGATGCCCCAGGCT 36281034 Query 127231 GAAAATCACGGACCC-GACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGAC 127289 || || | |||||| ||||| ||| | ||||| || |||||||| |||||||||||||| Sbjct 36281035 GAGAACGA-GGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAGCTGAAGAC 36281093 Query 127290 ATTGAGACTTCGACTGCGTCGCTG 127313 | | || ||||||| ||||| Sbjct 36281094 CCTCCGGCTGAGACTGCGGCGCTG 36281117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428651700299000